| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4624 |
|---|
| Symbol | |
|---|
| ID | 3370173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5482570 |
|---|
| End bp | 5485350 |
|---|
| Gene Length | 2781 bp |
|---|
| Protein Length | 926 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637654993 |
|---|
| Product | organic solvent tolerance protein |
|---|
| Protein accession | YP_237692 |
|---|
| Protein GI | 66047851 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1452] Organic solvent tolerance protein OstA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.47424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGA AATCCCCCGC GTTTCGTAAA AAATTTCCGT TGCTCGTAAC CGGCAGTCTG
CTGGCGATGC AACCTCTGGC CACTCAGTTC GTGGTCGCCG CGGAACAGTA TGACTGCTCA
GTCTCTGCTT CGGGTGCCTG GAACTGTGCG CCGAAATCCA ATGCTGCTGC AGTGGATCTG
CCTCCGCGCC CCGTGCATGA CACGACGTCG GTCAGCTCCA ACGGCACGGT CACCTCACAA
GGCACCTCTT CGGGTGAACA GTCTGCGGGT ACGCAACTGG TCACTGAAGC CAAGGGCAAA
GGTCTGAAGT CGCGTAGTGC TGACTACAGC CACCTCGATT GGGTTCCTCG CGAAAAGCTT
ACCGCAGCGC AACTGGCCGA GACCGGCCCG TATTGCTCGG GTGCCTACGT CGAGCCGATC
CGTCCTGGCA TGGACGACAA GACGCCGATG AAAGACGCGC CGATGTTCGT GGGAGCCAAG
GCTTCGCGTT ACGAACAGGA CGCGCAGGTC GCGACGCTGG CCGGTGATGT GGTGATGCGC
CAGGGCAGCA TGCAGGTGCA GGCCCAGGAG GCTGCACTGC ATCAGGCCGA GAACCGTGGC
GAGCTGAACG GCGATGTCCG TCTGCGCGAC AACGGTGCGC TGATCGTCGG TGACAAGGCC
GAACTGCAAC TCGACACCGG CGAAGCCCGT GTCGACAACG CCGAGTACGT CCTGCACAAG
TCGAACATTC GCGGTAACGC CCTGTACGCC AAGCGTGCAG AGAACGCGAT CATCCGGCTC
AAGGACGGTA CCTACACGAC GTGCGAGCCG AACAGCAACG CCTGGACGCT CAAGGGCAAC
AACATCACGC TGAACCCGGC CACCGGCTTC GGTACAGCGA CCAACGTTAC CCTGCGGGTC
AAGGACATAC CGGTTCTGTA CACGCCGTAT ATCTACTTCC CGATCGACGA CCGTCGTCAG
TCCGGTTTCC TGCCGCCGAC CATTGCAGCA GGTGGCGACA ACGGCTTCAC GCTGGTCACC
CCGTACTACT TCAACCTGGC ACCGAACTAC GACGCCACGT TGTACCCGCG TTACATGGCT
GATCGTGGCT TGCTGATGGA AGGCGAGTTC CGCTACCTGA CCAAGGGCAG CGAAGGTCAG
TTTGGCGGCG CGTACCTGAA CGACGAGAAT GACGACCGCA AACAGCAGTC CGATTACGAC
AAGACCCGCT GGATGATCAA CTGGCAGCAC AAGGGCGGGC TTGATACGCG CTGGCTGACC
CAGGTCGATT ACACCGATAT CAGTGATCCG TATTACTTCC AGGATCTGGA AACCGATCAG
ATCGGCGTAA AAAGAACAGA CTTCCTCAAC CAGCAGGGCT CCCTGACCTA CCGTGGCGAC
AGCTTCTCGG CAGTGCTCAA TGCTCAGGCC TACAAGCTGG CGACGGTTGC CAACGTTACG
CCGTACAACC GCCTGCCTCA GCTGACGCTC AACGGTACGT TGCCCTACAA CCCCGGCGGC
CTGAAGTTCG ATTATCAGAC CGAAGCCGTC CGCTTCGAGC GTGATCTGCG CAGCGGCGCG
TTCATCGATG AAGATGGCAA CTCCGAAACA CGTCTGGACA ACAACATCTC CGGCCTGGCT
CGCGCCAACG GTGATCGCCT GAACCTGGCA CCGTCGGTCA GCTTGCCGAT GAACTGGACC
TATGGCTTCC TGACGCCGAA GCTGAAGTAT GTCTACACGC AATACGATCT GGATCTGGAC
AGCCAGGGCA AAAACACCCT GCTGGCCGGC GAAGAGTACA GCAGCAGCCA AAGCCGCAGC
GTACCGATCT TCAGCGTCGA CAGCGGTCTG TACTTCGACC GCAATACCAA CTGGTTCGGC
AAGGATTACC GCCAGACCCT GGAGCCGCGC CTGTTCTATC TCTATGTTCC CGAGAAAGAC
CAGACCGATA TCCCGGTATT CGACACCAGC GAAAGCACGT TCAACTATGC CTCGCTGTTC
CGTGACAACC GTTTCACCGG CTCCGACCGC ATCGGCGACG AGAACAAACT GTCGCTGGGC
GTCACCAACC GCTGGATCGA GGACAACGGC TTCGAACGTC AACGCTTCAG CATCGGTCAG
GCGCTGTATT TCGAAGACCG CAAGGTGCAG TTGCCAGGCG TGGTGTTTGC TGATCGTGAT
GATGCGCGTT CCAACGTTTC GCCTTACGCA CTGGAATACG AATACCGCTT CAACCGCGAC
TGGCGCTTCA ACTCCGATTT CAACTGGGAT CCGGACAGCC GAAGCACCCG TTCGGGCAGC
GCAATGTTCC ACTACCAGCC TGAAGACAAC CCGAACAAGG TCGTCAACCT CGGCTATCGC
TATCGTAACG ACCAGATTCG TTACGACGAA AGCACCGGCC GTTGGGTCGT GGGCGGTGGC
GACTACGGCA CTCCGGGTTC GCCAAACTAC GTGAAGGACT ACTACAAGAT TCAGCAGCAC
GATTTCTCGG TCATCTGGCC GATCGTGCCG CAGTGGAGCC TGATCAGCCG TTGGCAGTAT
GACTACAACC GTGAACGCAC CATCGAAGCT TTCGGCGGGT TCGAGTACGA CAACTGCTGC
TGGAAAATGC GCCTGGTCAA TCGTTACTGG ATCGACTACG ACGAATTCAG CCAGGCAGCA
CCTCAGAACG AGAAAGGCGA CCGCGGCATA TTCCTACAAA TCGTGTTGAA GGGGCTCGGC
GGTGTAACTG GCGCCAAGGT AGACAGCTTC CTCGACAAAG GCATCCAAGG TTATCGTGAA
CGTGAAGACC AAGCTTTCTG A
|
|---|
| Protein sequence | MALKSPAFRK KFPLLVTGSL LAMQPLATQF VVAAEQYDCS VSASGAWNCA PKSNAAAVDL
PPRPVHDTTS VSSNGTVTSQ GTSSGEQSAG TQLVTEAKGK GLKSRSADYS HLDWVPREKL
TAAQLAETGP YCSGAYVEPI RPGMDDKTPM KDAPMFVGAK ASRYEQDAQV ATLAGDVVMR
QGSMQVQAQE AALHQAENRG ELNGDVRLRD NGALIVGDKA ELQLDTGEAR VDNAEYVLHK
SNIRGNALYA KRAENAIIRL KDGTYTTCEP NSNAWTLKGN NITLNPATGF GTATNVTLRV
KDIPVLYTPY IYFPIDDRRQ SGFLPPTIAA GGDNGFTLVT PYYFNLAPNY DATLYPRYMA
DRGLLMEGEF RYLTKGSEGQ FGGAYLNDEN DDRKQQSDYD KTRWMINWQH KGGLDTRWLT
QVDYTDISDP YYFQDLETDQ IGVKRTDFLN QQGSLTYRGD SFSAVLNAQA YKLATVANVT
PYNRLPQLTL NGTLPYNPGG LKFDYQTEAV RFERDLRSGA FIDEDGNSET RLDNNISGLA
RANGDRLNLA PSVSLPMNWT YGFLTPKLKY VYTQYDLDLD SQGKNTLLAG EEYSSSQSRS
VPIFSVDSGL YFDRNTNWFG KDYRQTLEPR LFYLYVPEKD QTDIPVFDTS ESTFNYASLF
RDNRFTGSDR IGDENKLSLG VTNRWIEDNG FERQRFSIGQ ALYFEDRKVQ LPGVVFADRD
DARSNVSPYA LEYEYRFNRD WRFNSDFNWD PDSRSTRSGS AMFHYQPEDN PNKVVNLGYR
YRNDQIRYDE STGRWVVGGG DYGTPGSPNY VKDYYKIQQH DFSVIWPIVP QWSLISRWQY
DYNRERTIEA FGGFEYDNCC WKMRLVNRYW IDYDEFSQAA PQNEKGDRGI FLQIVLKGLG
GVTGAKVDSF LDKGIQGYRE REDQAF
|
|---|
| |