| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4612 |
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| Symbol | |
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| ID | 3370161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5469722 |
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| End bp | 5470543 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637654981 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_237680 |
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| Protein GI | 66047839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.950111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACC CCTACACACC GCCGATCGAG CGCCTCTGGT ATTACACCTT GCGCATCATC
TGCACGCTGG TGCTGCTGTT TCTTGTGCTG CCGGTGCTGG TCATCGTGCC GCTGTCATTC
AACTCCGGCA GCTTTCTGGT CTATCCGCTG CAAGGCTTCT CGTTGCAGTG GTATCAGGAC
TTCTTCAACT CCGCCGAGTG GATGCGCGCG CTGAAGAACA GCATGATTGT CGCCCCGGCC
GCGACCCTGC TGGCGATGGG CTTCGGCACG CTGGCGGCGA TCGGCCTGAC CCGCGGCAAC
TTCCCCGGCA AGGCGCTGGT CATGGCCCTG GTGATTTCGC CGATGGTGGT GCCGGTGGTG
ATCGTCGGCG TCGCCAGCTA CCTGTTCTTC GCGCCACTGG GCCTGGGCAA TAGCTACACC
TCGCTGATTC TGGTCCATGC GGTGCTGGGT GTGCCGTTCG TGATCATCAC CGTGTCGGCG
ACGTTGCAGG GCTTCAATCA CAACCTGGTG CGTGCGGCTG CCAGCCTCGG TGCATCGCCG
CTGACCGCGT TCCGGCGCGT GACGCTGCCG CTGATTGCGC CGGGGGTGAT TTCCGGCGCG
CTGTTCGCCT TCGCGACCTC GTTCGACGAA GTGGTGGTCA CGCTGTTCCT CGCCGGGCCG
GAACAGGCGA CCCTGCCTCG GCAGATGTTC AGCGGCATTC GCGAAAACCT CAGCCCGACC
ATCGCCGCCG CTGCGACCCT GCTGATCGGC TTCTCGGTGG TCTTGCTGCT GGTGCTGGAG
TGGCTGAGGG GGCGCAGCGA AAAACTGCGA ACGGCGCAGT GA
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| Protein sequence | MLNPYTPPIE RLWYYTLRII CTLVLLFLVL PVLVIVPLSF NSGSFLVYPL QGFSLQWYQD
FFNSAEWMRA LKNSMIVAPA ATLLAMGFGT LAAIGLTRGN FPGKALVMAL VISPMVVPVV
IVGVASYLFF APLGLGNSYT SLILVHAVLG VPFVIITVSA TLQGFNHNLV RAAASLGASP
LTAFRRVTLP LIAPGVISGA LFAFATSFDE VVVTLFLAGP EQATLPRQMF SGIRENLSPT
IAAAATLLIG FSVVLLLVLE WLRGRSEKLR TAQ
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