Gene Psyr_4577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4577 
Symbol 
ID3370126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5439759 
End bp5440403 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content58% 
IMG OID637654946 
ProductcAMP-regulatory protein 
Protein accessionYP_237645 
Protein GI66047804 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCAA TAACCTTTAC GCCCAAAGCA AACAGTCTGG ACAAGCTGCT GCCCCATGCA 
GAACGCCGCC GCTGCCCCGC GAAAACCAAC ATCATCAATG CTGGTGAGCG TTCCGAGTCG
TTGTTTCTGA TCCTCAAGGG ATCAGTCACG GTTTTGATCG AAGACGACGA GCGCCGGGAG
ATGATCGTCG CCTATCTCAA CAGCGGGGAC TTCTTCGGCG AACTGGGTCT GTTCGAGCAA
GCGGGAAAGG AGTCCGTACG CAGCGCCTGG GTGCGGGCCA AGACCGAATG CGAAGTGGCC
GAGATTTCAT ATGACTCGTT CCGCGAGCTG ACCAGGCAAG AGCCGGAAAT TCTGTATGCG
CTCGGCAGCC AGATGGCCGA GCGCCTGCGC AATACAACGC GCAAGGTCGG TGATCTGGCG
TTTCTCGATG TCACCGGGCG AGTGGCTCGC ACGTTGCTCG AGTTGTGCAA GCAGCCGGAT
GCAATGACTC ACCCGGACGG CATGCAGATC AAGATTACCC GCCAGGAAAT CGGACGCATC
GTCGGCTGTT CGAGGGAAAT GGTCGGACGC GTGCTCAAGG CCCTTGAAGA ACAGAGCCTG
GTCAACGTCA AAGGCAAGAC CATGGTGGTC TTCGGGACAC GCTGA
 
Protein sequence
MVAITFTPKA NSLDKLLPHA ERRRCPAKTN IINAGERSES LFLILKGSVT VLIEDDERRE 
MIVAYLNSGD FFGELGLFEQ AGKESVRSAW VRAKTECEVA EISYDSFREL TRQEPEILYA
LGSQMAERLR NTTRKVGDLA FLDVTGRVAR TLLELCKQPD AMTHPDGMQI KITRQEIGRI
VGCSREMVGR VLKALEEQSL VNVKGKTMVV FGTR