Gene Psyr_4561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4561 
SymbolsecE 
ID3370101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5419660 
End bp5420028 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content52% 
IMG OID637654921 
Productpreprotein translocase subunit SecE 
Protein accessionYP_237629 
Protein GI66047788 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000432419 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.440887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCA AGGCTGAAGC ATCAGACTCT CGCTTTGATA TGCTGAAGTG GCTCCTGGTA 
GTCGTTTTGG TTGTCGTGGG TGTTGTCGGC AATCAGTATT ATTCTGCTGA GCCGATCCTG
TATCGCGTTC TCGCTCTCCT TGTGATTGCC GCAGCTGCTG CATTTGTAGC GCTGCAGACA
GGCAAAGGTA AGGCCTTCTT CGTTTTGGCG AAAGAAGCCC GTGCCGAGAT CCGTAAAGTC
GTATGGCCTA CTCGCCAAGA AACCACTCAA ACCACGTTGA TCGTTGTGGC TGTTGTGCTG
GTTATGGCGT TGCTGTTGTG GGGGCTTGAT TCCCTGCTCG GCTGGCTTGT TTCCTTGATA
GTTGGCTAA
 
Protein sequence
MNPKAEASDS RFDMLKWLLV VVLVVVGVVG NQYYSAEPIL YRVLALLVIA AAAAFVALQT 
GKGKAFFVLA KEARAEIRKV VWPTRQETTQ TTLIVVAVVL VMALLLWGLD SLLGWLVSLI
VG