Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4561 |
Symbol | secE |
ID | 3370101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5419660 |
End bp | 5420028 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637654921 |
Product | preprotein translocase subunit SecE |
Protein accession | YP_237629 |
Protein GI | 66047788 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0690] Preprotein translocase subunit SecE |
TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000432419 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.440887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCCA AGGCTGAAGC ATCAGACTCT CGCTTTGATA TGCTGAAGTG GCTCCTGGTA GTCGTTTTGG TTGTCGTGGG TGTTGTCGGC AATCAGTATT ATTCTGCTGA GCCGATCCTG TATCGCGTTC TCGCTCTCCT TGTGATTGCC GCAGCTGCTG CATTTGTAGC GCTGCAGACA GGCAAAGGTA AGGCCTTCTT CGTTTTGGCG AAAGAAGCCC GTGCCGAGAT CCGTAAAGTC GTATGGCCTA CTCGCCAAGA AACCACTCAA ACCACGTTGA TCGTTGTGGC TGTTGTGCTG GTTATGGCGT TGCTGTTGTG GGGGCTTGAT TCCCTGCTCG GCTGGCTTGT TTCCTTGATA GTTGGCTAA
|
Protein sequence | MNPKAEASDS RFDMLKWLLV VVLVVVGVVG NQYYSAEPIL YRVLALLVIA AAAAFVALQT GKGKAFFVLA KEARAEIRKV VWPTRQETTQ TTLIVVAVVL VMALLLWGLD SLLGWLVSLI VG
|
| |