Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4557 |
Symbol | rplJ |
ID | 3370097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5417169 |
End bp | 5417669 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637654917 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_237625 |
Protein GI | 66047784 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.669843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0090203 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCAATTA AACTCGAAGA CAAGAAGGCC ATCGTCGCTG AAGTCAACGA GGCTGCCAAA GCTGGTCTGT CCGCTGTCGT GGCTGATGCC CGTGGTGTGA CGGTTGGCGC AATGACCGGA CTCCGTAAAG AGGCTCGTGA AGCTGGCGTT TACGTACGTG TTGTACGTAA CACCCTGCTC AAGCGCGCTG TTGCTGACAC TGAATTCAGT GTTCTCAACG ACGTGTTCAC CGGCCCGACC TTGATCGCGT TCTCCAACGA ACATCCTGGC GCTGCTGCCC GTCTGTTCAA GGAATTCGCT AAAGGTCAGG ACAAGTTCGA GATCAAGGCA GCTGCGTTCG AGGGCAAGTT CCTCGCAGCT AATCAGATCG ATGTACTGGC AAGCCTGCCG ACCCGTAACG AAGCAATTTC TCAGCTGATG AGCGTGATTC AAGGCGCTAC CAGCAAATTG GCTCGTACTC TGGCGGCTGT TCGCGACCAA AAAGAAGCAG CTGCAGCCTA A
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Protein sequence | MAIKLEDKKA IVAEVNEAAK AGLSAVVADA RGVTVGAMTG LRKEAREAGV YVRVVRNTLL KRAVADTEFS VLNDVFTGPT LIAFSNEHPG AAARLFKEFA KGQDKFEIKA AAFEGKFLAA NQIDVLASLP TRNEAISQLM SVIQGATSKL ARTLAAVRDQ KEAAAA
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