| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4552 |
|---|
| Symbol | |
|---|
| ID | 3370092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5407001 |
|---|
| End bp | 5407471 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637654912 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_237620 |
|---|
| Protein GI | 66047779 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.881982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0692383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAA GACGCGTAGC AGCCAAGCGC GATGTGCTTG ACGATCCAAA ATACGGCAGC
CAGATTCTGG CCAAGTTCAT GAACCACGTG ATGGAGAGCG GCAAGAAAGC CGTTGCCGAG
CGTATCGTTT ATGGCGCGCT GGAAAAGGTT AAAGAACGTA AGAACAGCGA TCCCCTGGAA
ATCTTCGAGA AAGCTCTCGA CGCCATCGCT CCGCTGGTCG AAGTAAAGTC GCGCCGTGTA
GGCGGTGCTA CTTACCAGGT TCCTGTTGAA GTTCGTCCGT CCCGTCGTAA TGCTCTGGCA
ATGCGCTGGC TGGTAGACTT CGCGCGCAAG CGCGGTGAAA AGTCTATGGC TCTGCGTTTG
GCCGGCGAGC TGATGGACGC CGCCGAAGGT AAAGGTGCTG CAGTCAAGAA GCGTGAAGAC
GTGCACCGCA TGGCTGAAGC CAACAAGGCT TTCTCGCACT ACCGCTTCTA A
|
|---|
| Protein sequence | MPRRRVAAKR DVLDDPKYGS QILAKFMNHV MESGKKAVAE RIVYGALEKV KERKNSDPLE
IFEKALDAIA PLVEVKSRRV GGATYQVPVE VRPSRRNALA MRWLVDFARK RGEKSMALRL
AGELMDAAEG KGAAVKKRED VHRMAEANKA FSHYRF
|
|---|
| |