| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4547 |
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| Symbol | rplD |
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| ID | 3370087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5401855 |
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| End bp | 5402457 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637654907 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_237615 |
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| Protein GI | 66047774 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0714588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0640617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATTAA ATGTAAATGA CGCTCAGGCA ATCGAAGTTT CCGAACTGAC ATTTGGCGGC
GAATTCAACG AGACGCTGGT TCACCAGGCA GTCGTGGCCT ACATGGCTGG CGGTCGTCAG
GGTAGCAAGC AGCAAAAGAC CCGTTCCGAC GTTCGTGGTG GCGGTAAGCG CCCTTGGCGT
CAGAAAGGTA CTGGCCGTGC TCGTGCCGGT ACTATCCGTA GCCCAATCTG GCGTGGCGGC
GGTACCACTT TCGCAGCTCG TCCTCAGGAT CACACTCAGA AGCTCAACAA GAAGATGTAT
CGCGCTGCGC TGCGCTCCAT CCTTGCTGAA CTGGTTCGTA CTGATCGTCT GGTCGTGGTT
CAGGACTTCG CTGTTGAAGC ACCGAAAACC AAAGATTTGC TGAACAAGCT GACTGGCATG
GGCCTGACTG ACGTCCTGAT CGTGTCTGAC GCTGTTGACC AGAATCTGTA CCTGGCTGCT
CGTAACCTGC CGCACGTTGA TGTACGTGAC GTTCAAGGTT CCGATCCAGT TAGTCTGATC
GCATACGACA AAGTGTTGAT CACTGTGTCG GCCGTGAAGA AATTCGAGGA GCTGCTGGGA
TGA
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| Protein sequence | MQLNVNDAQA IEVSELTFGG EFNETLVHQA VVAYMAGGRQ GSKQQKTRSD VRGGGKRPWR
QKGTGRARAG TIRSPIWRGG GTTFAARPQD HTQKLNKKMY RAALRSILAE LVRTDRLVVV
QDFAVEAPKT KDLLNKLTGM GLTDVLIVSD AVDQNLYLAA RNLPHVDVRD VQGSDPVSLI
AYDKVLITVS AVKKFEELLG
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