Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4545 |
Symbol | rplB |
ID | 3370085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5400720 |
End bp | 5401544 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637654905 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_237613 |
Protein GI | 66047772 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0677044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCG TTAAATGCAA ACCGACTTCC CCTGGCCGCC GTTTTGTGGT CAAGGTGGTC AACCAGGAGC TGCATAAAGG CGCTCCTCAC GCACCGCTGC TCGAGAAAAA ATCGAAGTCT GGTGGTCGTA ACAACAATGG TCGTATTACT ACCCGTCATA TCGGTGGTGG CCATAAACAG CATTATCGTC TGGTCGACTT CCGTCGCAAC GACAAGGATG GCATCGCTGC CACCGTCGAG CGTATCGAAT ACGATCCAAA CCGTACTGCT CACATTGCTC TGCTGCTTTA CGCAGACGGC GAGCGCCGCT ACATCATCGC CCCTAAAGGC GTGAGTGCTG GCGACCAGCT GATTGCAGGT GCTCTGGCAC CAATCAAGCC GGGCAACGCT CTTCAACTGC GCAACATTCC AGTTGGTAGC ACCGTACACG GCATCGAACT GAAGCCAGGC AAAGGCGCAC AGATCGCTCG TTCCGCTGGT GCCTCGGCAC AGCTGATCGC TCGTGAAGGT GTGTACGTGA CCCTGCGTCT TCGCTCCGGT GAAATGCGTA AAGTACTGTC TGAGTGCCGT GCAACGCTGG GCGAAGTCTC GAACTCCGAG CACAGCCTTC GTTCGCTGGG TAAAGCGGGT GCCAAACGCT GGCGTGGCGT TCGCCCAACC GTTCGTGGTG TTGCCATGAA CCCGGTTGAC CACCCACATG GTGGTGGTGA AGGTCGTACC TCTGGTGGTC GTCATCCGGT ATCGCCGTGG GGCTTCCCGA CTAAGGGCGC GAAGACTCGT GGTAATAAGC GTACCGACAA AATGATCGTC CGTCGTCGCA AGTAA
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Protein sequence | MAIVKCKPTS PGRRFVVKVV NQELHKGAPH APLLEKKSKS GGRNNNGRIT TRHIGGGHKQ HYRLVDFRRN DKDGIAATVE RIEYDPNRTA HIALLLYADG ERRYIIAPKG VSAGDQLIAG ALAPIKPGNA LQLRNIPVGS TVHGIELKPG KGAQIARSAG ASAQLIAREG VYVTLRLRSG EMRKVLSECR ATLGEVSNSE HSLRSLGKAG AKRWRGVRPT VRGVAMNPVD HPHGGGEGRT SGGRHPVSPW GFPTKGAKTR GNKRTDKMIV RRRK
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