Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4506 |
Symbol | |
ID | 3370046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5370347 |
End bp | 5371108 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654866 |
Product | glycerophosphodiester phosphodiesterase |
Protein accession | YP_237574 |
Protein GI | 66047733 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.236568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAC CTGCTCCCCT CGTCCGCTCG CCCCTGATTG CCCATCGCGG TGCCAAGGCT TACGTGCCGG AAAACACTCT GCTGGCCCTG GAAAAAGCTG CCGAATGCGG CGCCGAGTGG GTCGAGATCG ACGTGAAGCT GACCCGCGAT GGCCAGCCTG TCGTGATTCA TGACGACTTG CTGGACCGCA CCACCAACGG GCGCGGCGCC GTCGTGCTGC ATGATCTGAA AGCTATCCGC ACACTGGACG CGGGCAGCTG GTTCGCGCCT GAATTCGCCG GTTTGCAGGT CCCGACCTTT GAAGAGATCG TGGCCTGTGC GCTGCGCCTC AACCTGGGTC TGCAGGTCGA ACTCAAGCCG ACCATTGGCG ACGATGTCGA GACGGCGGAA GTGGTGATGC CGATTCTCAA AAACCTGTGG CCCGCCGACA ACGACCGGTT GTTCGTCTCC AGCTTTTCGG TGCGCTCGCT AACGGCCGCC CGACGCTTAT GGAACGACGT ACCACTGGCT ATTGCCTCGG TGGTGGCGCC TGCCGACCCG GTCGCGCTGT TGGCCGAATA TGACTGCCGA ATACTTCACG TACTTGACGA TATGCTCGAT GACCATCACC TTGTTCGCCT GAAAAGCAGC GGCGTCGAAT TCGCCGTGGC TACCATCAAC AGCCCGAAAC GTGCGCGCTA CCTGCTAGAA CATGGCGCAC AGTCGATTCT CAGTGATTAC CCGGACTTGT TGAACCTGCC GAACGGAGGC TGTCTGCAAT GA
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Protein sequence | MLKPAPLVRS PLIAHRGAKA YVPENTLLAL EKAAECGAEW VEIDVKLTRD GQPVVIHDDL LDRTTNGRGA VVLHDLKAIR TLDAGSWFAP EFAGLQVPTF EEIVACALRL NLGLQVELKP TIGDDVETAE VVMPILKNLW PADNDRLFVS SFSVRSLTAA RRLWNDVPLA IASVVAPADP VALLAEYDCR ILHVLDDMLD DHHLVRLKSS GVEFAVATIN SPKRARYLLE HGAQSILSDY PDLLNLPNGG CLQ
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