Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4502 |
Symbol | |
ID | 3370042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5366138 |
End bp | 5367457 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654862 |
Product | extracellular solute-binding protein |
Protein accession | YP_237570 |
Protein GI | 66047729 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.714222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCA TCCGTAAGAT GTTTTCCGTG CTGGCCCTGC TGTCGCTCGC TGCAAACGCC TTCGCCGCGG CACCGGCCGA GTTCTGGTAC AGCCACAGTG GCGCGGCCGG GAGTGCCATC GCGGATCTGT GCAGAAGCTT CAATGCGCCA CGCGAGGAAG GTGATCGCCT GCACTGTGTC CGCCAGGGCA GTTATGAGCA GACGCTGCAG AAAACCGTAG CGGCTTACCG GGCGGGCATA GGCCCGGCAC TGGTGGAGAT TTACGACGTT GCCACGCCTG ACATGCTGCT GGGCGGTGCC ACCCGACCTG TCGAGGCGAT CATGGCCGAT CATCACAGGG CCTATCCCGA CGATACCTTT CTGCCAGCCT TGCGGCGCTA TTACGCCGAC GACCACGGCA CGCTCGCGGC GCAGCCTTTT GCGGCGTCCA CAGCCGTGCT TTATACACAC CGGAAGGCGC TGGCCGCTGC CGGGATCAGC GAGCCACCCG CCACCTGGGA AGCCTTTGCG GATGCCTTGC GGGCCCTGAA GAAAAACGGT CAGCAATGCC CGCTCGTCAG CGCCTTTGCC CCCTGGATCT GGCTTGAGCA AACCAGCGCA GCGCAAGGCA CCGACGTTGC GATTCGCTCC GCAGGCGGTG ACCGCTATCA GTTCGACGAA GGCCCCCATC TGCGCCTCAT GAAAGACCTC GCGCAATGGA CCTCCCAAGG TCTGGTGGTC CATGAGGATG CAACCCGCAG CGGGCAGCAG GCGCTGGCGT TCGCCACCGA CGATTGCGCC ATGCTGCTCG ACTCCACCGG GGCGTGGAAT GTTGTACACA GCACGCTCAA ATCCGATATC CAGGTCACGG CACTGCCGAT TTACGCGGCC ACCCAGCGAC GTGCCAACGT TCCCGGAGGT TCCTCGCTGT GGGTCATGCG CGGGCATTCC GTCAGGGATT ACCGGCTGGT CTCGGAATTT CTGGCGTTCG TGCTGCAACC GGACAACCAG TTGATATTCA GCGCCCGAAC GGGCTACCTG CCCGTTACCC AGGCCGCCGC TGCACGTTTG CAATCCGCAG CCAGCGAGCC ATCGGCAATC ACGGTCGGAC TGACAGCGCT GGACGATATC GACGGTCAGC CTTCCGCGCC TTTGCGCTGC GGCTTTATCA CGCTGATGCG CCTCATCTGG TCGCAGGAAA TGGAGAACGC GCTCGCGGGT CGCCAGAGCA TCGATCTGGC CCTGCGCCAG ACGACGCTAC GGGCCAACGA GCTGCTGGGT CTGTTTCAAC AGATGCACCG CGCCCAGGCC AGCAACGAGT CGAGCGAGGC CACGCCATGA
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Protein sequence | MPSIRKMFSV LALLSLAANA FAAAPAEFWY SHSGAAGSAI ADLCRSFNAP REEGDRLHCV RQGSYEQTLQ KTVAAYRAGI GPALVEIYDV ATPDMLLGGA TRPVEAIMAD HHRAYPDDTF LPALRRYYAD DHGTLAAQPF AASTAVLYTH RKALAAAGIS EPPATWEAFA DALRALKKNG QQCPLVSAFA PWIWLEQTSA AQGTDVAIRS AGGDRYQFDE GPHLRLMKDL AQWTSQGLVV HEDATRSGQQ ALAFATDDCA MLLDSTGAWN VVHSTLKSDI QVTALPIYAA TQRRANVPGG SSLWVMRGHS VRDYRLVSEF LAFVLQPDNQ LIFSARTGYL PVTQAAAARL QSAASEPSAI TVGLTALDDI DGQPSAPLRC GFITLMRLIW SQEMENALAG RQSIDLALRQ TTLRANELLG LFQQMHRAQA SNESSEATP
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