| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4441 |
|---|
| Symbol | |
|---|
| ID | 3369981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5307920 |
|---|
| End bp | 5309185 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637654801 |
|---|
| Product | heat shock protein YegD |
|---|
| Protein accession | YP_237509 |
|---|
| Protein GI | 66047668 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACC AATCCCCGGC CCGTGCCTGC GGTATCGATT TCGGCACGTC CAACTCCACT
GTCGGCTGGC AACGACCCGG CATGGAATCG TTGATCGCGC TGGAGGACGA CAAGATTACC
CTGCCTTCGG TGGTGTTCTT CAATATGGAA GAGCGCCGCC CGGTGTATGG CCGCCTGGCG
CTGCACGAGT ATCTGGAAGG CTATGAAGGC CGCCTGATGC GCTCGCTCAA AAGCCTGCTG
GGCTCCAAGC TGATCAAACA TGACACCAGC GTGCTGGGCA CAGCGATGCC CTTCAAGGAT
TTGCTGGCCC TGTTTATCGG CGAGCTGAAA AAGCGCGCGG AGCAAACGGC CGGCCGCGAA
TTCGAGCAGG TCGTGCTGGG CCGTCCGGTG CATTTTGTCG ATGACGACGC ACAGGCCGAT
CAGGAAGCCG AAGACACGCT GGCTGAAGTG GCGCGCAAGA TCGGCTTCAA GGACGTGTCC
TTCCAGTTCG AGCCCATCGC GGCGGCCTTC GACTACGAGT CCACCATCCA GGACGAAGAA
CTGGTGCTGA TCGTCGACAT TGGCGGCGGT ACCTCGGACT TTTCGCTGGT GCGTCTGTCG
CCCGAGCGAC GCCAGCACGA TGATCGCCAG CAGGACATCC TCGCCACCGG TGGCGTGCAC
ATCGGCGGGA CCGACTTCGA CAAGCAGTTG AGCCTGCAAG GCGTGATGCC GCTGTTCGGT
TATGGCAGCC GCATGAAAAG CGGTGCGTAC ATGCCGACCA GCCACCATAT GAACCTGGCG
ACCTGGCACA CGATCAACGC GGTGTACTCG CAAAAGTCGC AACTGGCCCT GGGCAGCATG
CGCTACGACA TCGAAGACAC CGGCGGCATC GATCGCCTGT TCAAACTGAT CGAACAGCGC
GCCGGGCACT GGCTGGCCAT GGAAGTGGAA GAAACCAAGA TCCAGCTGAC CCACGCCGAC
AGCCGTCACC TGCTCATGGA TCGAGTGGAA GCCGGACTGA GCGTGGACCT TAGCCGGGTG
ATGTTCGAAG CCGCCATCGA CGCCCAGCTT GAGCGCGTGC GCAACAGCGT GACGAACTTG
CTCAACGATG CGGGAGTGAG TGTCGAACAG GTCAGCACGG TGTTCTTCAC CGGCGGTTCA
AGCGGTATCC CGGCCCTGCG CAACAGCGTC TCGGACATGC TGCCCAACGC ACGCCACGTC
GAAGGCAACA TCTTCGGCAG CATCGGCAGC GGCCTGGCCA TCGAAGCGAA GAAACGTTAC
GGCTAG
|
|---|
| Protein sequence | MNDQSPARAC GIDFGTSNST VGWQRPGMES LIALEDDKIT LPSVVFFNME ERRPVYGRLA
LHEYLEGYEG RLMRSLKSLL GSKLIKHDTS VLGTAMPFKD LLALFIGELK KRAEQTAGRE
FEQVVLGRPV HFVDDDAQAD QEAEDTLAEV ARKIGFKDVS FQFEPIAAAF DYESTIQDEE
LVLIVDIGGG TSDFSLVRLS PERRQHDDRQ QDILATGGVH IGGTDFDKQL SLQGVMPLFG
YGSRMKSGAY MPTSHHMNLA TWHTINAVYS QKSQLALGSM RYDIEDTGGI DRLFKLIEQR
AGHWLAMEVE ETKIQLTHAD SRHLLMDRVE AGLSVDLSRV MFEAAIDAQL ERVRNSVTNL
LNDAGVSVEQ VSTVFFTGGS SGIPALRNSV SDMLPNARHV EGNIFGSIGS GLAIEAKKRY
G
|
|---|
| |