| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4427 |
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| Symbol | |
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| ID | 3369967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5295137 |
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| End bp | 5296726 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654787 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_237495 |
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| Protein GI | 66047654 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0483913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.930967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCTT ATTTTTACCG TTTGATCCTC GCCATCTGCC TGCTGCTGCC TTTGGCTGCC
CAGGCCGGTG ATGCCAGCGA CTTTGTCGCA GCCAGTTCTT CGCAACAGGC AGAACTGCTG
GAGGCCTGGG CCGCCAAGCC TGTGCCGGAA CGCGTCGAGC TGCTTGAAGC CTTACGCGAT
GGCCGTGTGG GTGCCGACAG CAGCAAGCGC GCCTGGATCG AAAACAACGA TCAATACGTG
GCCGTCGATG CACAGGCACC AGCCGCCGCC GATGCGCCAA CGCCTGACGA ACCGCGTAAA
TTGCGCTTGA ACAACCGGCT GCGCGGCCTG GTTGAAACCG CGCTGGCCAG CCACCAGTTG
CTGGCAGCCG ATACACGACT GCGCATGGCC GCCGCCCTGC AATTGCAAAA AAGCGCCCGC
CCTGCACAAC TGGAGTTGCT GACCGAACGC GTGGCCGGCG AAACAGATTC CAGCGTCAAA
AGCGCACTGA CCCTGGCGCT GGCCAACCTG CAAATGGTCG ATTCCAGCCC GACAGTACGT
CTGGCTGCCG TGCGACTGCT GGGCGAAACC GGTGATCCGC TGGCGCGTAC CCGTCTTGAA
TCATTGCTGG CGCCCGGCGT GGAAACCGAC GCTTCGGTAC GCGTGGCGGC TGAAACCAGC
CTGGCGCAGG TCAAGCGCAA GCTGATGATC GGTGAGATCC TCGGCCAGGC GTTTAGCGGC
ATGTCGCTGG GCTCTATCCT GTTGCTGGCG GCGCTGGGTC TGGCGATCAC CTTCGGCCTG
CTGGGCGTGA TCAACATGGC CCATGGCGAG ATGCTGATGC TGGGGGCCTA CTCCACCTAC
GTCGTGCAAC TGATGCTGCA GCGCTACGCA CCGGGGGCCA TCGAGTACTA CCCGCTGATC
GCGTTGCCGG TGGCGTTCTT TGTCACCGCC GCGATCGGCA TGGCCCTGGA GCGTACGGTC
ATTCGTCATC TGTATGGCCG CCCACTGGAA ACCCTGCTGG CGACCTGGGG CATCAGCCTG
ATGCTGATTC AGGCCGTGCG TCTGGCCTTC GGCGCGCAGA ACGTCGAAGT CGCCAACCCG
CAATGGCTGT CTGGCGGCAT CCAGGTGCTG CCTAATCTGG TGCTGCCTTA CAACCGCATC
GTGATCATCG CGTTCGCGCT GTTCGTGGTG GTGCTGACCT GGCTGCTGCT GAACAAGACC
CGCCTGGGCC TGAACGTGCG CGCCGTCACC CAGAACCGCA ACATGGCCGC CTGCTGTGGC
GTACCGACCG GGCGCATCGA CATGATGGCC TTCGGTCTGG GTTCAGGTAT CGCAGGTCTG
GGGGGTGTAG CCCTGAGCCA GATCGGCAAC GTGGGCCCTG ATCTTGGCCA AAGCTACATC
ATCGATTCGT TCCTGGTGGT CGTGCTCGGC GGTGTCGGGC AACTGGCCGG TAGCGTGATG
GCGGCCTTCG GGCTGGGCAT CGCCAACAAG ATTCTCGAAC CGCAAATCGG CGCCGTGTTG
GGCAAGATCC TGATCCTGGC GCTGATCATT CTGTTTATCC AGAAACGTCC GCAAGGCCTC
TTCGCATTGA AAGGACGGGT GATCGACTGA
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| Protein sequence | MPSYFYRLIL AICLLLPLAA QAGDASDFVA ASSSQQAELL EAWAAKPVPE RVELLEALRD
GRVGADSSKR AWIENNDQYV AVDAQAPAAA DAPTPDEPRK LRLNNRLRGL VETALASHQL
LAADTRLRMA AALQLQKSAR PAQLELLTER VAGETDSSVK SALTLALANL QMVDSSPTVR
LAAVRLLGET GDPLARTRLE SLLAPGVETD ASVRVAAETS LAQVKRKLMI GEILGQAFSG
MSLGSILLLA ALGLAITFGL LGVINMAHGE MLMLGAYSTY VVQLMLQRYA PGAIEYYPLI
ALPVAFFVTA AIGMALERTV IRHLYGRPLE TLLATWGISL MLIQAVRLAF GAQNVEVANP
QWLSGGIQVL PNLVLPYNRI VIIAFALFVV VLTWLLLNKT RLGLNVRAVT QNRNMAACCG
VPTGRIDMMA FGLGSGIAGL GGVALSQIGN VGPDLGQSYI IDSFLVVVLG GVGQLAGSVM
AAFGLGIANK ILEPQIGAVL GKILILALII LFIQKRPQGL FALKGRVID
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