Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4401 |
Symbol | |
ID | 3369941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5262284 |
End bp | 5263627 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637654761 |
Product | acetyl-CoA carboxylase biotin carboxylase subunit |
Protein accession | YP_237469 |
Protein GI | 66047628 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.172287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGGAAA AAGTTCTGAT CGCCAACCGC GGCGAAATTG CCTTGCGCAT CTTGCGTGCC TGTAAAGAAC TGGGCATCAA GACCGTCGCT GTACACTCCA CCGCAGATCG CGAGCTGATG CACCTGGGCC TGGCAGACGA AACCGTCTGC ATCGGTCCGG CACCGGCCAA TCTGTCCTAC CTGAACATTC CGGCGATCAT TTCGGCTGCC GAAGTGACCG GCGCCACCGC GATCCACCCG GGTTACGGGT TTCTCGCCGA GAACGCCGAC TTCGCCGAAC AGGTCGAAAA ATCCGGCTTT GCCTTCATCG GTCCAAAAGC AGACACCATT CGCCTGATGG GTGACAAGGT TTCCGCCAAG GACGCCATGA AGCTGGCCAA CGTGCCGACC GTTCCCGGTT CCGACGGCCC GCTGCCGGAA GACGAAGCCA CCGCTCTGCG CATTGGTCGT GAAGTCGGTT ACCCGGTGAT CATCAAGGCC GCCGGTGGCG GTGGTGGTCG CGGCATGCGT GTGGTTCATC GCGAAGAAGA CCTGATCGAA GCCGCTTCCC AGACCCGCGC CGAAGCAGCC GCCTGGTTCA GCAACCCGAT GGTCTACCTG GAAAAATACC TGACCAACCC ACGTCACGTG GAAGTTCAGG TGATTTCCGA CGGTCAGGGC CAGGCCATCC ACCTGGGCGA TCGTGACTGC TCGCTGCAGC GCCGCCATCA GAAGGTTCTG GAAGAAGCGC CGGCACCGTT CATCGATGAA AAGGCGCGCG AGGATGTTCT GGCTGCCTGC GTCAAGGCGT GTATCGATAT CGGCTATCGC GGTGCGGGTA CGTTCGAGTT CCTGTACGAG AACGGTCGTT TCTACTTCAT CGAAATGAAC ACCCGTGTTC AGGTGGAGCA TCCGGTTTCG GAAATGGTCA CCGGCATCGA CATCGTCAAG GAGATGCTCA GCATCGCCGC CGGCAACAAA CTGTCGTATA CCCAGGATGA CGTGGTCATC AAGGGCCATG CGCTGGAATG CCGGATCAAC GCCGAAGACC CGAAGACCTT CGTGCCAAGC CCAGGTCTGG TCAAGCATTT CCACGCACCG GGCGGCAACG GTGTACGGGT CGATTCGCAC CTGTACAGCG GCTACAAGGT ACCGTCCAAC TATGACTCGC TGATCGGTAA AGTGATCACC TGGGGCGCGA CCCGCGAAGA AGCCATGGCA CGCATGCGCA ATGCCCTGGA CGAAATCGTG GTCGACGGGA TCAAGACCAA CATCCCGCTG CACCGCGACC TGACCCGCGA TGAAGGCTTC TGCGAAGGCG GAGTCAACAT CCACTACCTG GAGCACAAAC TGGCCAATCA ATAA
|
Protein sequence | MLEKVLIANR GEIALRILRA CKELGIKTVA VHSTADRELM HLGLADETVC IGPAPANLSY LNIPAIISAA EVTGATAIHP GYGFLAENAD FAEQVEKSGF AFIGPKADTI RLMGDKVSAK DAMKLANVPT VPGSDGPLPE DEATALRIGR EVGYPVIIKA AGGGGGRGMR VVHREEDLIE AASQTRAEAA AWFSNPMVYL EKYLTNPRHV EVQVISDGQG QAIHLGDRDC SLQRRHQKVL EEAPAPFIDE KAREDVLAAC VKACIDIGYR GAGTFEFLYE NGRFYFIEMN TRVQVEHPVS EMVTGIDIVK EMLSIAAGNK LSYTQDDVVI KGHALECRIN AEDPKTFVPS PGLVKHFHAP GGNGVRVDSH LYSGYKVPSN YDSLIGKVIT WGATREEAMA RMRNALDEIV VDGIKTNIPL HRDLTRDEGF CEGGVNIHYL EHKLANQ
|
| |