Gene Psyr_4401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4401 
Symbol 
ID3369941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5262284 
End bp5263627 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content59% 
IMG OID637654761 
Productacetyl-CoA carboxylase biotin carboxylase subunit 
Protein accessionYP_237469 
Protein GI66047628 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.172287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAA AAGTTCTGAT CGCCAACCGC GGCGAAATTG CCTTGCGCAT CTTGCGTGCC 
TGTAAAGAAC TGGGCATCAA GACCGTCGCT GTACACTCCA CCGCAGATCG CGAGCTGATG
CACCTGGGCC TGGCAGACGA AACCGTCTGC ATCGGTCCGG CACCGGCCAA TCTGTCCTAC
CTGAACATTC CGGCGATCAT TTCGGCTGCC GAAGTGACCG GCGCCACCGC GATCCACCCG
GGTTACGGGT TTCTCGCCGA GAACGCCGAC TTCGCCGAAC AGGTCGAAAA ATCCGGCTTT
GCCTTCATCG GTCCAAAAGC AGACACCATT CGCCTGATGG GTGACAAGGT TTCCGCCAAG
GACGCCATGA AGCTGGCCAA CGTGCCGACC GTTCCCGGTT CCGACGGCCC GCTGCCGGAA
GACGAAGCCA CCGCTCTGCG CATTGGTCGT GAAGTCGGTT ACCCGGTGAT CATCAAGGCC
GCCGGTGGCG GTGGTGGTCG CGGCATGCGT GTGGTTCATC GCGAAGAAGA CCTGATCGAA
GCCGCTTCCC AGACCCGCGC CGAAGCAGCC GCCTGGTTCA GCAACCCGAT GGTCTACCTG
GAAAAATACC TGACCAACCC ACGTCACGTG GAAGTTCAGG TGATTTCCGA CGGTCAGGGC
CAGGCCATCC ACCTGGGCGA TCGTGACTGC TCGCTGCAGC GCCGCCATCA GAAGGTTCTG
GAAGAAGCGC CGGCACCGTT CATCGATGAA AAGGCGCGCG AGGATGTTCT GGCTGCCTGC
GTCAAGGCGT GTATCGATAT CGGCTATCGC GGTGCGGGTA CGTTCGAGTT CCTGTACGAG
AACGGTCGTT TCTACTTCAT CGAAATGAAC ACCCGTGTTC AGGTGGAGCA TCCGGTTTCG
GAAATGGTCA CCGGCATCGA CATCGTCAAG GAGATGCTCA GCATCGCCGC CGGCAACAAA
CTGTCGTATA CCCAGGATGA CGTGGTCATC AAGGGCCATG CGCTGGAATG CCGGATCAAC
GCCGAAGACC CGAAGACCTT CGTGCCAAGC CCAGGTCTGG TCAAGCATTT CCACGCACCG
GGCGGCAACG GTGTACGGGT CGATTCGCAC CTGTACAGCG GCTACAAGGT ACCGTCCAAC
TATGACTCGC TGATCGGTAA AGTGATCACC TGGGGCGCGA CCCGCGAAGA AGCCATGGCA
CGCATGCGCA ATGCCCTGGA CGAAATCGTG GTCGACGGGA TCAAGACCAA CATCCCGCTG
CACCGCGACC TGACCCGCGA TGAAGGCTTC TGCGAAGGCG GAGTCAACAT CCACTACCTG
GAGCACAAAC TGGCCAATCA ATAA
 
Protein sequence
MLEKVLIANR GEIALRILRA CKELGIKTVA VHSTADRELM HLGLADETVC IGPAPANLSY 
LNIPAIISAA EVTGATAIHP GYGFLAENAD FAEQVEKSGF AFIGPKADTI RLMGDKVSAK
DAMKLANVPT VPGSDGPLPE DEATALRIGR EVGYPVIIKA AGGGGGRGMR VVHREEDLIE
AASQTRAEAA AWFSNPMVYL EKYLTNPRHV EVQVISDGQG QAIHLGDRDC SLQRRHQKVL
EEAPAPFIDE KAREDVLAAC VKACIDIGYR GAGTFEFLYE NGRFYFIEMN TRVQVEHPVS
EMVTGIDIVK EMLSIAAGNK LSYTQDDVVI KGHALECRIN AEDPKTFVPS PGLVKHFHAP
GGNGVRVDSH LYSGYKVPSN YDSLIGKVIT WGATREEAMA RMRNALDEIV VDGIKTNIPL
HRDLTRDEGF CEGGVNIHYL EHKLANQ