Gene Psyr_4361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4361 
Symbol 
ID3369901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5213965 
End bp5215152 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content59% 
IMG OID637654721 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_237429 
Protein GI66047588 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0572554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCATTA GGATTCTCGA GAGACGGATG AACATCACCA CCTTTGCAAA ACGTTTGTGC 
CTGCTTGTTC CACTGATTAT CACCCCGACT GTGTGGGCGG CAGAGCAGAT GACGCCTGCT
GCACCGCAAC TGGCGGCCAA GTCCTACGTG CTGATGGATG CCACCAGTGG CAACGTCCTG
GTCGAGAACA ATGGTGATCA GCGTCTGGCT CCTGCCAGCC TGACCAAGCT GATGACCGCC
TACATCGCGA CCCTGGAAAT CCGTCGCGGC CAGATCGGCG AAAACGATCC GGTGACGATC
AGTGAAAACG CCTGGCGCAC AGGCGGTTCG CGGATGTTCA TCAAGGTCGG CAGCCAGGTC
ACGGTCAGCG ACCTGTTGCA CGGCATCATC ATCCAGTCGG GTAACGACGC CAGTGTCGCG
ATCTCCGAGC ACATCGCCGG CAGCGAAGAC GCCTTCGCCG ACATGATGAA CAAGACTGCC
GGCGACCTGG GCATGACCAA CAGCCACTTC ATGAACCCGA CCGGTCTGCC GAACCCTGAG
CACTACTCGT CGGCTCACGA CATGGCGATC CTGGCACGCG CGATCATTCA CGAGGACCCG
GCCCACTATG CGATCTACTC GCAGAAGGAG TTCTTCTGGA ACGGCATCAA ACAGCCTAAC
CGTAACCTGC TGCTGTGGCG CGACAAGACC GTTGACGGTC TGAAAACCGG TCACACCGAT
GAAGCCGGCT ACTGCATGGT GTCCTCGGCA GTACGTGACG GCATGCGCCT GATCGCCGTG
GTGTTCGGCA CCAACAGCGA ACAGGCCCGT GCGGCGGAAA CCCAGAAGCT GCTGACCTAT
GGCTTCCGTT TCTTCGAAAC CCAGAACTTC TATCAGAAGG GCACCGAGCT GGCCCAGGCC
ACGGTCTGGA AAGGCACCGA GCGTCAGGTC AAGGCCGGTC TGGCTGAAGA TCTGAGCATG
ACCATGCCAA AAGGCGACAT GAAGAAGCTG TCTGCCAGCA TGACCATGAA CCCGCAACTG
GTTGCGCCAA TCGCCAAGGG CGACGTGATC GGCAAGGTCG AGGTCAAGAA AGACGATCAG
GTGGTTCACA CCGCCAATCT GATTGCGCTC GATGGGGTTG AGGAAGGTGG TATTTTCCGC
CGCGTGTGGG ATAGCATCCG CCTGTTCTTC TACGGCTTGT TCAACTGA
 
Protein sequence
MPIRILERRM NITTFAKRLC LLVPLIITPT VWAAEQMTPA APQLAAKSYV LMDATSGNVL 
VENNGDQRLA PASLTKLMTA YIATLEIRRG QIGENDPVTI SENAWRTGGS RMFIKVGSQV
TVSDLLHGII IQSGNDASVA ISEHIAGSED AFADMMNKTA GDLGMTNSHF MNPTGLPNPE
HYSSAHDMAI LARAIIHEDP AHYAIYSQKE FFWNGIKQPN RNLLLWRDKT VDGLKTGHTD
EAGYCMVSSA VRDGMRLIAV VFGTNSEQAR AAETQKLLTY GFRFFETQNF YQKGTELAQA
TVWKGTERQV KAGLAEDLSM TMPKGDMKKL SASMTMNPQL VAPIAKGDVI GKVEVKKDDQ
VVHTANLIAL DGVEEGGIFR RVWDSIRLFF YGLFN