Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4340 |
Symbol | |
ID | 3369880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5193951 |
End bp | 5194748 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654700 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_237408 |
Protein GI | 66047567 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.994514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCT ATAGCTCCCG CCCCGTAGTC CTTTGCCTGT CCGGCCACGA CCCTAGTGGC GGTGCCGGTA TGCAGGCCGA TATAGAAGCC CTGCTCGCCC AAGGCTGCCA TGCCGCTCCG GTCATTACCG CGCTTACGGT GCAAGACACC GTCAATGTCA GTGATTTCCG CGTGCTGGAT CGCGAATGGG TGATGGCGCA AGCCAATGCA GTCCTCAACG ATTCGAGCGT AGCAGCTGTC AAGCTGGGCA TGCTCGGCTC ACTGGAAATG GTCGATACGG TCGTCGATCT GCTTCTGGCT CACCCGCACT TGCCCATGGT CTGTGATCCG GTGTTACGCG CTGGCGGCGG CGGCAGACTG GGCAAGGACG AGGTCGGCTA CGCCATGCGC GAACGCCTGT TGCCACTGTC GACCATCGCC ACGCCGAACC TTCCGGAAGC CCGCATTCTT GCCGAGCTGC CCGAAGGTAC TGCGGATGAG TGCGCTGACA AACTACTGCC GTTTTGTGAA TATCTGTTGA TCACTGGCGG TCATGGTGAT GAACAGCAAA TCCATAACCG CCTGTACCTG CGCGGCGGCC AGACCCACAC CTTCGTCTGC GAGCGTCTGC CCGGTAGCTA TCACGGTTCC GGCTGCACCC TGGCCAGCGC ACTGGCCGGG CGGATCGCCC AGGGGCAGGA GCTGGTCAGC GCGGTGAAGT CGGCACTCGA CTACACCTGG CGAACGCTGA GGGATGCCGA ACAGTTGGGC CGGGGGCAAT TCGTGCCACG TCGGCTGCCG CTGGATTTTT GCTCGTAA
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Protein sequence | MNIYSSRPVV LCLSGHDPSG GAGMQADIEA LLAQGCHAAP VITALTVQDT VNVSDFRVLD REWVMAQANA VLNDSSVAAV KLGMLGSLEM VDTVVDLLLA HPHLPMVCDP VLRAGGGGRL GKDEVGYAMR ERLLPLSTIA TPNLPEARIL AELPEGTADE CADKLLPFCE YLLITGGHGD EQQIHNRLYL RGGQTHTFVC ERLPGSYHGS GCTLASALAG RIAQGQELVS AVKSALDYTW RTLRDAEQLG RGQFVPRRLP LDFCS
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