Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4325 |
Symbol | |
ID | 3369865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5177347 |
End bp | 5178687 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637654685 |
Product | transcriptional regulator GntR |
Protein accession | YP_237393 |
Protein GI | 66047552 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTTG ATGCCCTTTA TGACTCGCTG AAACAGCGCC TTGAATCAGG CGAGTGGCTG GCTGGACAAC GTATGCCGTC GATAAGGAAG CTGGCCTTGA CTGCCGAAGC GAGCTACCAC GATGCCGTCT CGGCCTATGC TCGCCTGGTG AGTGAAGGTG TGCTGTCGGC TTCTCCCGGA CGCGGTTACT TTGTGAGCAG TCATGTCACC CATGTGGATA ACGTGCGGGA AATAGAGTGC ATGAGCGCCG ACCCACTGTT CAGGCTGCTA CAGGCAGGGC CGCACTACAC CAAGCTGGGA TGTGGCTGGC TGCCACCGGC ATGGCGAGAT ACCGAATTGC TGGCCAAGGC CATTCGACGC ACGGCGCGGC TGGAGCAAAG TTCGCTGGCC GAATACGGCG ACATTTCCGG CTATCTCCCG ATGCGTAAAC AGCTTTGCGT TCACCTGAAG CGTCTCACCC GTATCGACAT CAGACCCAGT CAGATCCTCA CCACCCTGGG AGCAACGCAG GGCCTGGATC TGGTTGCCCG CCTATTGATC AAGCCCGGTG ACCATGTATT CGTGGACGAG CCGGGCAATG GCAACCTGAT CAGGTTGATT CAGTTGGCGG GCGGACATGT TGTGGGTATA AAGCGGACTC AGGACGGGAC GGACATTGCC GAGATGGAGA GTTATCTGGC GAAGCACACG GTCAAAGCGT TCTTCTGCAA TAGCACCTTC CACAATCCGA CCGGCAGCAA CATCAGCCCG CACAATGCTT TCAAGGTTCT GCGTCTTGCT GTAGAGCACG AGTTCTTTGT GGTCGAAGAT GATGCCTATG GTGACTTCAG CCCCACTGTC CGCCAGACGT TTGCCGAACT GGATAATCTG GATCGTGTGA TCTACGTCGG CAGTTTTTCC AAATGCCTTT CTGCTTCGCT GCGCGTGGGT TATATCGCCT GCTCGCAAGA GCTCATCGAG CCGCTGACAC GCTTGAAACT CCTGACATGC GTTGCCGTTC CAGCGTTCTG CGAGCGGTTC GTCAACACCA TTCTTGCGGA CGGTACTTAT GCCCGGCACA TGCAGGATGT TCAACAGAGG CTTATCAGCC AGCAGGTCCA GACTCAACGC GCCCTGCGAG CAAGAGGCTG GCAATTCGAT ATAGCACCGC AGGGCGGCAT GTTCATCTGG GCCTATCACT CGGACATCCC TAACCTGGAG CCCTTCATAA AGAAACTTGA ACAACACAAG ATCCTGCTGA TGCCGGGCTC GGCGTTCTCG GTGTCGCGCG ACTACCAGCG TTTTGCGCGA ATAAACTGCA CGCATTTTTC CGAGGCAATA GAAGAACGCT TTTCAGTGTG A
|
Protein sequence | MSVDALYDSL KQRLESGEWL AGQRMPSIRK LALTAEASYH DAVSAYARLV SEGVLSASPG RGYFVSSHVT HVDNVREIEC MSADPLFRLL QAGPHYTKLG CGWLPPAWRD TELLAKAIRR TARLEQSSLA EYGDISGYLP MRKQLCVHLK RLTRIDIRPS QILTTLGATQ GLDLVARLLI KPGDHVFVDE PGNGNLIRLI QLAGGHVVGI KRTQDGTDIA EMESYLAKHT VKAFFCNSTF HNPTGSNISP HNAFKVLRLA VEHEFFVVED DAYGDFSPTV RQTFAELDNL DRVIYVGSFS KCLSASLRVG YIACSQELIE PLTRLKLLTC VAVPAFCERF VNTILADGTY ARHMQDVQQR LISQQVQTQR ALRARGWQFD IAPQGGMFIW AYHSDIPNLE PFIKKLEQHK ILLMPGSAFS VSRDYQRFAR INCTHFSEAI EERFSV
|
| |