Gene Psyr_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4282 
Symbol 
ID3369822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5105606 
End bp5107045 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content60% 
IMG OID637654642 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_237350 
Protein GI66047509 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.586205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTT TAGAGGCTAT AGATCTCGCC CGGATTCAGT TCGCATTCAC GATTTCGTTC 
CACATCCTGT TTCCTGCCAT CACCATCGGT CTGGCAAGTT ACCTGGCTGT GCTCGAAGGT
CTGTGGCTGA AGACCCGCGA TGACGTCTAC CGTGACCTGT ACCACTTCTG GTCGAAGATT
TTTGCAGTCA ACTTCGGCAT GGGCGTGGTT TCCGGGCTTG TCATGGCCTA CCAGTTCGGC
ACCAACTGGA GCCGCTTCTC CGACTTCGCA GGTGCTGTGA CCGGCCCGCT GCTGACCTAC
GAGGTGCTGA CCGCGTTCTT CCTCGAAGCG GGGTTCCTCG GCGTCATGCT GTTCGGCTGG
AATCGTGTCG GCCGCAACCT GCACTTCTTC TCTACGGTAA TGGTCGCCAT CGGCACGCTG
ATCTCCACCT TCTGGATTCT GTCGTCCAAC AGCTGGATGC AGACCCCGCA AGGGTTCGAG
ATCATCGACG GTCGGGTCAT TCCCACTGAC TGGTTCGCTG TGGTGTTCAA CCCGTCGTTC
CCTTATCGCC TGACGCACAT GGCGATCGCC GCGTTCGTGG CGACGGCGTT CTTCGTCGGT
TCGTCGGCTG CCTGGCATCT GTTGCGGGGT CGCGACACAC CTGCGGTGCG CAAGATGCTC
TCGATGGCCA TGTGGATGGC CCTGCTGGTG GCGCCTGTCC AGGCTGTCGT CGGTGACTTC
CACGGTCTGA ACACGCTCAA GCATCAGCCT GCGAAGATTG CGGCCATCGA AGGTCACTGG
GAGAACGTCG GTGACGAACC GACCCCGCTG ATCCTGTTCG GCATTCCCGA CATGAAGGAA
GAACGTACCA AGTACGCGGT GGAAATTCCG TACCTGGGCA GCCTGATCCT GACTCACAGC
CTGGACAAGC AGGTGCCTGC GCTCAAGGAA TTCAAGCCTG AGGATCGCCC TAATTCGACG
ATCGTGTTCT GGTCGTTCCG GGTCATGGTC GCCCTTGGCA TGCTGATGAT CTTCACCGGC
CTTTGGAGCT TGTGGCTGCG CAAGCGCGGC ACGCTGTACA ACTCGCGTCC GTTCCTGTAT
CTGGCGTTGT GGATGGGGCC ATCCGGCCTG ATCGCTATTC TCGCCGGCTG GTTCACCACC
GAAATCGGCC GTCAGCCGTG GGTCGTGTAC GGCCTGATGC GCACCGCCGA TGCTTCGTCC
GGGCACAGCG TGGCGCAGAT GAGCATCACC CTGGTGCTGT TCGTGGTCGT CTACTTCGTG
CTCTTCGGCA CCGGTCTTGG CTACATGATG CGTCTGGTTC GCAAAGGGCC GAAAGCCTAT
GTCGAACATG TGCCGCACGG TGGTCCCGGC CAGCAACGCA CACCGGCCCG TCCGCTCTCC
GCTGCTGTTG AAGGCGAAGA AGATGGCGAC AATCTTGACC GTCACGGCAA GGGGATTTAA
 
Protein sequence
MFGLEAIDLA RIQFAFTISF HILFPAITIG LASYLAVLEG LWLKTRDDVY RDLYHFWSKI 
FAVNFGMGVV SGLVMAYQFG TNWSRFSDFA GAVTGPLLTY EVLTAFFLEA GFLGVMLFGW
NRVGRNLHFF STVMVAIGTL ISTFWILSSN SWMQTPQGFE IIDGRVIPTD WFAVVFNPSF
PYRLTHMAIA AFVATAFFVG SSAAWHLLRG RDTPAVRKML SMAMWMALLV APVQAVVGDF
HGLNTLKHQP AKIAAIEGHW ENVGDEPTPL ILFGIPDMKE ERTKYAVEIP YLGSLILTHS
LDKQVPALKE FKPEDRPNST IVFWSFRVMV ALGMLMIFTG LWSLWLRKRG TLYNSRPFLY
LALWMGPSGL IAILAGWFTT EIGRQPWVVY GLMRTADASS GHSVAQMSIT LVLFVVVYFV
LFGTGLGYMM RLVRKGPKAY VEHVPHGGPG QQRTPARPLS AAVEGEEDGD NLDRHGKGI