Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4276 |
Symbol | mscL |
ID | 3369816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5101077 |
End bp | 5101523 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637654636 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_237344 |
Protein GI | 66047503 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.348387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC TTAAGGAATT CAAGGCATTC GCGGTCAAAG GCAACGTAGT TGATATGGCC GTCGGTATTA TCATCGGCGC GGCATTCGGC AAGATCGTTT CTTCGTTCGT CGGCGATGTC ATCATGCCGC CGCTGGGCCT GTTGATTGGC GGTGTCGACT TCAGCGACCT GGCCGTCACC CTGCGTCCTG CGCAAGGGAC TGCACCTGCG GTACTGCTGG CGTACGGCAA GTTCATCCAG ACCGTCATCG ACTTCATCAT CGTCGCGTTC GCGATATTCA TGGGCGTCAA GGCCATCAAC CGCCTGAAAC GCGAAGAAGC CAAAGCCCCT ACCCTGCCAC CAACGCCCTC CAAGCAGGAA ATCCTGCTGG GCGAGATTCG CGACCTGCTC AAAGAGCAGA GCAAACCGGC AGCGCCCATT ACCGTGGATC CTGCGCGTAC GCTTTGA
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Protein sequence | MSVLKEFKAF AVKGNVVDMA VGIIIGAAFG KIVSSFVGDV IMPPLGLLIG GVDFSDLAVT LRPAQGTAPA VLLAYGKFIQ TVIDFIIVAF AIFMGVKAIN RLKREEAKAP TLPPTPSKQE ILLGEIRDLL KEQSKPAAPI TVDPARTL
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