Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4273 |
Symbol | |
ID | 3369813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5096778 |
End bp | 5098853 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654633 |
Product | carbon starvation protein CstA |
Protein accession | YP_237341 |
Protein GI | 66047500 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA ATAATAGTCT GATGCGCCAT GTTCCCTGGC TCATCGTTGC AATTGTCGGG GCATGTGCCC TTGGGGTCGT GGCCTTGCGC CGCGGAGAGG CGATCAACGC CTTGTGGATA GTGGTCGCTG CGGTAGCTAT CTACCTGGTT GCCTATCGTT ACTACAGTCT TTTCATCGCC ACTCACGTCA TGCAGCTCGA TCCGCTGCGC GCGACACCGG CGGTGGTCAA CAACGACGGT CTGGACTATG TGCCGACCAA CAAACACATT CTCTTCGGAC ACCACTTTGC CGCCATCGCT GGCGCAGGCC CGCTGGTCGG CCCGGTACTG GCAGCGCAAA TGGGCTATCT GCCCGGCACG CTCTGGCTGA TCGCAGGCGT GGTGCTGGCC GGTGCGGTGC AGGACTTCAT GATCCTGTTC CTCTCCACGC GCCGTGACGG ACGCTCGCTG GGTGACATGG TTCGCGAGGA AATGGGCCGT ATTCCCGGCA CCATCGCGCT GTTCGGCTGC TTCCTGATCA TGATCATCAT CCTGGCGGTG CTGGCGCTGA TCGTGGTCAA GGCCCTGGCC GAGAGCCCGT GGGGCATGTT CACGGTCATG GCGACGATCC CGATCGCGAT GTTCATGGGC ATTTATATGC GCTACATCCG TCCGGGGCGC ATTGGTGAAA TCTCCATCGT CGGTGTCATT CTGTTGCTCG GTTCGATCTG GGTCGGCGGG ATGGTAGCGG CGGATCCGAC CTGGGGGCCG ATGTTCACGT TCACCGGTGT GCAGATCACC TGGATGCTGG TCGGTTACGG CTTTGTAGCG GCCATGCTGC CGGTCTGGCT GCTGCTTGCG CCCCGTGACT ACCTGTCGAC CTTCCTGAAA ATCGGCACCA TTCTGGCACT CGCGATCGGC ATCCTGATCC TGGCGCCCGA GCTGAAAATG CCGGCCCTGA CCCAGTTCAC CAACGGCACA GGCCCGGTCT GGAAGGGCGC ATTGTTCCCG TTCCTGTTCA TCACCATTGC CTGCGGTGCA GTGTCGGGTT TCCACGCACT GATCTCCTCG GGCACCACGC CCAAGCTGCT GGATAACGAG AAGAACGCCC GTTACATCGG TTACGGCGGC ATGTTGATGG AGTCCTTCGT GGCCATCATG GCGATGGTTG CCGCTTCGGT GATCGAGCCG GGCGTGTACT TCGCCATGAA CAGCCCGGCT GCCGTGGTCG GCAGTGACGT GGTGACCGTC GCGCAGACGG TGTCCAGCTG GGGCTTTGCC ATCACGCCGG AGCAACTGAC GGCTGTGGCG AAAGACATTG GTGAAAACAC CGTGCTGGCG CGGGCTGGTG GTGCTCCGAC GCTGGCCGTC GGTATCGCAC AGATCCTCCA TCAGGTGCTG CCGGGTGAAA ACACCATGGC GTTCTGGTAC CACTTTGCGA TTCTGTTCGA GGCGCTGTTC ATCCTGACCG CCGTCGACGC CGGGACACGT GCCGGACGCT TCATGCTGCA GGACCTGCTG GGCAGCTTCG TTCCGGCCTT GAAACGCACC GAGTCGTGGA CGGCCAACGC CATCGGCACC GGCGGTTGCG TGGCGCTGTG GGGCTATCTG CTCTATCAGG GCGTCATCGA CCCGCTGGGC GGCATCAATA CCTTATGGCC GCTGTTCGGT ATCTCCAACC AGATGCTCGC CGGTATCGCC CTGATGCTGG CCAGCGTGGT GCTGATCAAG ATGAAGCGTC AGCGCTACGT CTGGGTGACC ATGCTGCCTG CCGTCTGGCT GCTGATCTGC ACCGTGACCG CTGGCTTGAT CAAGCTGTTC GACGCCAACC CTGCGGTAGG TTTCCTGGCC CTGGCCAAGA AATACAGCGC GGCGGCCGAT GCCGGTCAGA TTCTGGCCCC GGCCAAGACC ATGGACCAGA TGCAGCACGT GATCTTCAAC GCTTACACCA ACGCCGGGCT GACCGTGCTG TTCCTGTTCG TGGTGTTCAG CATCCTGTTC TACGCCATTA AAGTCGGCCG TGCGGCCTGG AGCACCAAGG AGCGCACCGA CAAGGAAGCG CCATTCCAGG CCATGCCGCC AGCGTCGCAG GTGTGA
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Protein sequence | MKNNNSLMRH VPWLIVAIVG ACALGVVALR RGEAINALWI VVAAVAIYLV AYRYYSLFIA THVMQLDPLR ATPAVVNNDG LDYVPTNKHI LFGHHFAAIA GAGPLVGPVL AAQMGYLPGT LWLIAGVVLA GAVQDFMILF LSTRRDGRSL GDMVREEMGR IPGTIALFGC FLIMIIILAV LALIVVKALA ESPWGMFTVM ATIPIAMFMG IYMRYIRPGR IGEISIVGVI LLLGSIWVGG MVAADPTWGP MFTFTGVQIT WMLVGYGFVA AMLPVWLLLA PRDYLSTFLK IGTILALAIG ILILAPELKM PALTQFTNGT GPVWKGALFP FLFITIACGA VSGFHALISS GTTPKLLDNE KNARYIGYGG MLMESFVAIM AMVAASVIEP GVYFAMNSPA AVVGSDVVTV AQTVSSWGFA ITPEQLTAVA KDIGENTVLA RAGGAPTLAV GIAQILHQVL PGENTMAFWY HFAILFEALF ILTAVDAGTR AGRFMLQDLL GSFVPALKRT ESWTANAIGT GGCVALWGYL LYQGVIDPLG GINTLWPLFG ISNQMLAGIA LMLASVVLIK MKRQRYVWVT MLPAVWLLIC TVTAGLIKLF DANPAVGFLA LAKKYSAAAD AGQILAPAKT MDQMQHVIFN AYTNAGLTVL FLFVVFSILF YAIKVGRAAW STKERTDKEA PFQAMPPASQ V
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