Gene Psyr_4273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4273 
Symbol 
ID3369813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5096778 
End bp5098853 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content62% 
IMG OID637654633 
Productcarbon starvation protein CstA 
Protein accessionYP_237341 
Protein GI66047500 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA ATAATAGTCT GATGCGCCAT GTTCCCTGGC TCATCGTTGC AATTGTCGGG 
GCATGTGCCC TTGGGGTCGT GGCCTTGCGC CGCGGAGAGG CGATCAACGC CTTGTGGATA
GTGGTCGCTG CGGTAGCTAT CTACCTGGTT GCCTATCGTT ACTACAGTCT TTTCATCGCC
ACTCACGTCA TGCAGCTCGA TCCGCTGCGC GCGACACCGG CGGTGGTCAA CAACGACGGT
CTGGACTATG TGCCGACCAA CAAACACATT CTCTTCGGAC ACCACTTTGC CGCCATCGCT
GGCGCAGGCC CGCTGGTCGG CCCGGTACTG GCAGCGCAAA TGGGCTATCT GCCCGGCACG
CTCTGGCTGA TCGCAGGCGT GGTGCTGGCC GGTGCGGTGC AGGACTTCAT GATCCTGTTC
CTCTCCACGC GCCGTGACGG ACGCTCGCTG GGTGACATGG TTCGCGAGGA AATGGGCCGT
ATTCCCGGCA CCATCGCGCT GTTCGGCTGC TTCCTGATCA TGATCATCAT CCTGGCGGTG
CTGGCGCTGA TCGTGGTCAA GGCCCTGGCC GAGAGCCCGT GGGGCATGTT CACGGTCATG
GCGACGATCC CGATCGCGAT GTTCATGGGC ATTTATATGC GCTACATCCG TCCGGGGCGC
ATTGGTGAAA TCTCCATCGT CGGTGTCATT CTGTTGCTCG GTTCGATCTG GGTCGGCGGG
ATGGTAGCGG CGGATCCGAC CTGGGGGCCG ATGTTCACGT TCACCGGTGT GCAGATCACC
TGGATGCTGG TCGGTTACGG CTTTGTAGCG GCCATGCTGC CGGTCTGGCT GCTGCTTGCG
CCCCGTGACT ACCTGTCGAC CTTCCTGAAA ATCGGCACCA TTCTGGCACT CGCGATCGGC
ATCCTGATCC TGGCGCCCGA GCTGAAAATG CCGGCCCTGA CCCAGTTCAC CAACGGCACA
GGCCCGGTCT GGAAGGGCGC ATTGTTCCCG TTCCTGTTCA TCACCATTGC CTGCGGTGCA
GTGTCGGGTT TCCACGCACT GATCTCCTCG GGCACCACGC CCAAGCTGCT GGATAACGAG
AAGAACGCCC GTTACATCGG TTACGGCGGC ATGTTGATGG AGTCCTTCGT GGCCATCATG
GCGATGGTTG CCGCTTCGGT GATCGAGCCG GGCGTGTACT TCGCCATGAA CAGCCCGGCT
GCCGTGGTCG GCAGTGACGT GGTGACCGTC GCGCAGACGG TGTCCAGCTG GGGCTTTGCC
ATCACGCCGG AGCAACTGAC GGCTGTGGCG AAAGACATTG GTGAAAACAC CGTGCTGGCG
CGGGCTGGTG GTGCTCCGAC GCTGGCCGTC GGTATCGCAC AGATCCTCCA TCAGGTGCTG
CCGGGTGAAA ACACCATGGC GTTCTGGTAC CACTTTGCGA TTCTGTTCGA GGCGCTGTTC
ATCCTGACCG CCGTCGACGC CGGGACACGT GCCGGACGCT TCATGCTGCA GGACCTGCTG
GGCAGCTTCG TTCCGGCCTT GAAACGCACC GAGTCGTGGA CGGCCAACGC CATCGGCACC
GGCGGTTGCG TGGCGCTGTG GGGCTATCTG CTCTATCAGG GCGTCATCGA CCCGCTGGGC
GGCATCAATA CCTTATGGCC GCTGTTCGGT ATCTCCAACC AGATGCTCGC CGGTATCGCC
CTGATGCTGG CCAGCGTGGT GCTGATCAAG ATGAAGCGTC AGCGCTACGT CTGGGTGACC
ATGCTGCCTG CCGTCTGGCT GCTGATCTGC ACCGTGACCG CTGGCTTGAT CAAGCTGTTC
GACGCCAACC CTGCGGTAGG TTTCCTGGCC CTGGCCAAGA AATACAGCGC GGCGGCCGAT
GCCGGTCAGA TTCTGGCCCC GGCCAAGACC ATGGACCAGA TGCAGCACGT GATCTTCAAC
GCTTACACCA ACGCCGGGCT GACCGTGCTG TTCCTGTTCG TGGTGTTCAG CATCCTGTTC
TACGCCATTA AAGTCGGCCG TGCGGCCTGG AGCACCAAGG AGCGCACCGA CAAGGAAGCG
CCATTCCAGG CCATGCCGCC AGCGTCGCAG GTGTGA
 
Protein sequence
MKNNNSLMRH VPWLIVAIVG ACALGVVALR RGEAINALWI VVAAVAIYLV AYRYYSLFIA 
THVMQLDPLR ATPAVVNNDG LDYVPTNKHI LFGHHFAAIA GAGPLVGPVL AAQMGYLPGT
LWLIAGVVLA GAVQDFMILF LSTRRDGRSL GDMVREEMGR IPGTIALFGC FLIMIIILAV
LALIVVKALA ESPWGMFTVM ATIPIAMFMG IYMRYIRPGR IGEISIVGVI LLLGSIWVGG
MVAADPTWGP MFTFTGVQIT WMLVGYGFVA AMLPVWLLLA PRDYLSTFLK IGTILALAIG
ILILAPELKM PALTQFTNGT GPVWKGALFP FLFITIACGA VSGFHALISS GTTPKLLDNE
KNARYIGYGG MLMESFVAIM AMVAASVIEP GVYFAMNSPA AVVGSDVVTV AQTVSSWGFA
ITPEQLTAVA KDIGENTVLA RAGGAPTLAV GIAQILHQVL PGENTMAFWY HFAILFEALF
ILTAVDAGTR AGRFMLQDLL GSFVPALKRT ESWTANAIGT GGCVALWGYL LYQGVIDPLG
GINTLWPLFG ISNQMLAGIA LMLASVVLIK MKRQRYVWVT MLPAVWLLIC TVTAGLIKLF
DANPAVGFLA LAKKYSAAAD AGQILAPAKT MDQMQHVIFN AYTNAGLTVL FLFVVFSILF
YAIKVGRAAW STKERTDKEA PFQAMPPASQ V