Gene Psyr_4231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4231 
Symbol 
ID3369771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5038879 
End bp5040138 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID637654591 
Productsensor histidine kinase 
Protein accessionYP_237299 
Protein GI66047458 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCC CCGTTAAAAT GCTTTCAGCC ACACGACAAA ACCTGTGGCG CCTGACATTC 
ATCCGTATTC TGGTGCTGGC CGCGCAGGCC GGCTCGGTCG GTATGGCCTG GCTGTTCGAC
TTTCTGCCGT TGCCCTGGCT GCAACTGTCG ATCACCCTGG GCTGCTCACT GGTGCTCTGC
GGGCTGACGG TCATCCGTCT GCGCACCTCG CTGCCGCTCA CCGAGCTTGA ATATGCGCTG
CAACTGGCGC TGGACCTGCT GATCCACAGC GCGCTGCTGT ATTACTCGGG CGGCTCGGCC
AACCCGTTCG TTTCCTATTA TCTGGTGCCG CTGACTATCG CCGCTGCCAC GCTGCCGTGG
CGCTACTCGC TGATCCTGTC CGGCTTTGCG CTGAGCATGT ACACCTTGTT GATGGTGCGT
TCCTACCCGC TGGAAACCGA CTCCATCGCC CGGGAAAACA TGCAGATCTA CGGCATGTGG
CTGAGTTTTG CCCTGGCGGC GGCAGTAATC ACCTTCTTTG CCGCGAAGAT GGCCGAAGAG
TTGCGTCGTC AGGAGCAACT GCGTGCCGAG CGTCGCGAAG AAGGCCTGCG TGATCAGCAG
TTGCTCGCCG TCGCGACCCA GGCCGCAGGG GCTGCCCATG AATTGGGAAC GCCGCTGGCA
ACCATGAGCG TGCTGCTCAA GGAGATGCGC CAGGATCACA GTGACCCGGC CTTGCAGGAT
GACCTGTCCG TGCTGCAGGA GCAGGTCAAG CAGTGCAAGC AGACCCTGCA GCAACTGGTG
CGCGCCGCCG AAGCCAATCG GCGTATGGCT GTCGAATATC AGGCTGCCAC CCGCTGGCTG
GATGAGTCCC TTAACCGCTG GCATCTGATG CGCCCGGAAG TGAGTTACCG TTTCTATAAG
CTGGGCAAGG GCGAAGCGCC GATGCTGGCG CCGCCGCCGG ACCTGACTCA GGCGCTGCTC
AACCTGCTCA ACAACGCTGC CGATGCCTGC CCCGATGGCC TTGAAGTCAA CCTGGACTGG
GACAGTGCGG AAATCTGCAT CAGCATTCGC GACCATGGCG CGGGTGTGCC GCTGGCGATT
GCCGAACAGA TCGGCAAACC GTTCTTTACT ACCAAGGGCA AAGGTTTCGG CCTGGGTCTG
TTCCTGAGCA AGGCCAGCGT CACCCGTGCG GGTGGCTCGG TGAAGCTCTA CAGTCATGAA
GAAGGCGGTA CGCTCACCGA GCTGCGCCTG CCCCGAGATA CGCGAGGAGA AGAAGCATGA
 
Protein sequence
MLAPVKMLSA TRQNLWRLTF IRILVLAAQA GSVGMAWLFD FLPLPWLQLS ITLGCSLVLC 
GLTVIRLRTS LPLTELEYAL QLALDLLIHS ALLYYSGGSA NPFVSYYLVP LTIAAATLPW
RYSLILSGFA LSMYTLLMVR SYPLETDSIA RENMQIYGMW LSFALAAAVI TFFAAKMAEE
LRRQEQLRAE RREEGLRDQQ LLAVATQAAG AAHELGTPLA TMSVLLKEMR QDHSDPALQD
DLSVLQEQVK QCKQTLQQLV RAAEANRRMA VEYQAATRWL DESLNRWHLM RPEVSYRFYK
LGKGEAPMLA PPPDLTQALL NLLNNAADAC PDGLEVNLDW DSAEICISIR DHGAGVPLAI
AEQIGKPFFT TKGKGFGLGL FLSKASVTRA GGSVKLYSHE EGGTLTELRL PRDTRGEEA