Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4227 |
Symbol | |
ID | 3369767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5034437 |
End bp | 5035348 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654587 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_237295 |
Protein GI | 66047454 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.881982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAC AAGAACTGAA GTCCATCCTC TCTTCCGGTC TGCTGTCTTT CCCGGTTACC GATTTCAATG CCCAGGGCGA TTTTCATCGC GCTGGCTACA TCAAACGCCT CGAGTGGCTG GCTCCGTATG GCGCAAGCGC TCTGTTCGCC GCCGGCGGCA CGGGTGAGTT TTTCTCCCTG GCTGCCAGCG AATATTCCGA AATCATCAAG ACTGCCGTCG ACACTTGCGC CACCAGCGTG CCAATCCTCG CCGGTGTAGG CGGTGCGACC CGTCAGGCCA TCGAGTACGC TCAGGAAGCC GAGCGTCTGG GCGCCAAGGG CTTGCTGCTG CTGCCGCACT ACCTGACCGA AGCCAGCCAG GACGGTGTTG CCGCTCACGT CGAAGCCGTG TGCAAATCGG TGAAGATCGG TGTGGTGGTC TACAACCGTA ACGTCTGCCG CCTGACGCCA ACCCTGCTGG AACAACTGGC CGAGCGTTGC CCTAACCTGA TCGGTTACAA GGATGGCCTG GGTGATATCG AGCTGATGGT TTCGATCCGC CGCCGTCTCG GTGACCGTTT CTCGTACCTG GGCGGCCTGC CGACCGCTGA AGTCTATGCC GCTGCCTACA AGGCGCTGGG CGTGCCGGTC TACTCGTCCG CAGTGTTCAA CTTCGTACCG AAACTGGCGA TGGACTTCTA CCACGCCATC GCCCGCGACG ATCATCAGGC GGTCGGCAAG TACATCGACG ATTTCTTCCT GCCTTACCTG GAAATCCGCA ACCGCAAGGC CGGTTATGCC GTGAGCATCG TCAAGGCCGG CGCGAAGATC GCCGGTTATG ACGCAGGTCC GGTGCGCGCA CCGTTGACCG ATCTGACGTC AGACGAGTGC GACATGCTCG CTGCACTGAT GGACAAGCAG GGCAAGCAGT AA
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Protein sequence | MNPQELKSIL SSGLLSFPVT DFNAQGDFHR AGYIKRLEWL APYGASALFA AGGTGEFFSL AASEYSEIIK TAVDTCATSV PILAGVGGAT RQAIEYAQEA ERLGAKGLLL LPHYLTEASQ DGVAAHVEAV CKSVKIGVVV YNRNVCRLTP TLLEQLAERC PNLIGYKDGL GDIELMVSIR RRLGDRFSYL GGLPTAEVYA AAYKALGVPV YSSAVFNFVP KLAMDFYHAI ARDDHQAVGK YIDDFFLPYL EIRNRKAGYA VSIVKAGAKI AGYDAGPVRA PLTDLTSDEC DMLAALMDKQ GKQ
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