Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4212 |
Symbol | |
ID | 3369752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5017555 |
End bp | 5018535 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654572 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal |
Protein accession | YP_237280 |
Protein GI | 66047439 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGCC CAATACTGCT GAACGTCAAT GATCTGGTGG TGCGCTTCCC GGCACCCGGC TCGGGTTTCA TGGGCCTCAA CAAGCGTTGG GTGCATGCCG TCAACGGTGT GTCACTGAGC ATTTGCGCGG GTGAAACGCT GGGGCTGGTC GGCGAGTCCG GCAGCGGCAA GAGCACGCTG GGCCGCGCCA TTCTGCGCCT GAATGACATT ACCTCCGGGC AGATCGTCTT CGATGACGTC GACATGGCCC AGGGCAGCGG TATCAATCTG CAACGCCTGC GCAGCGAAAC CGCGATGGTC TTTCAGGACC CGTCCTCTTC GCTCAATCCG CGCATGACCA TCGGTGCGAC GCTGGCCGAG GTGCTTGCCG TGCAGCGCAA GGTCGCCACT TCCGACATTC CGGCGCGGGT CACCGAGCTG CTCGACATGG TCGGTCTGCG GCCCGAATTT GCCGAACGCA AGCCGGGTGC CTTGAGCGGC GGACAATGTC AGCGTGTCGG TATCGCTCGC GCGCTGGCCA TCGAGCCACG GCTGATCATT GCCGACGAAT GCGTGGCGGC GCTGGACGTT TCGATTCAGG GGCAGATCAT CAACCTGCTG CTGGAGCTGC GCCAGCGCAT GAACCTGGCG ATTCTGTTCA TCGCCCATGA CCTGGCCATC GTGCGTCGCC TGTGTGATCG GGTGGCGGTG ATGTACCTGG GCAGAATCGT TGAAGAAGGC CCGGTCGAGG ATGTCTTTGT TTCGCCGCGC CACCCCTATA CCGCGGCGCT GATTCAGGCG ATTCCGGAAA TCGATCCGGA TCGTCCTTTG CTCGGCGAGC CATTGCAGGG TGAGCCGCCA AGCCCCCTGA ATTTGCCCGA CGGCTGCGCG TTTCATCCGC GTTGCCGGTT TGCCAGGCCG ACCTGCTCCA GCGTCGCGCC ACCGACCCGG CATGTCGGCC AGCAGCGCTA CGACTGCGTG CTGGAAGCCC CGGTTTTTTG A
|
Protein sequence | MSGPILLNVN DLVVRFPAPG SGFMGLNKRW VHAVNGVSLS ICAGETLGLV GESGSGKSTL GRAILRLNDI TSGQIVFDDV DMAQGSGINL QRLRSETAMV FQDPSSSLNP RMTIGATLAE VLAVQRKVAT SDIPARVTEL LDMVGLRPEF AERKPGALSG GQCQRVGIAR ALAIEPRLII ADECVAALDV SIQGQIINLL LELRQRMNLA ILFIAHDLAI VRRLCDRVAV MYLGRIVEEG PVEDVFVSPR HPYTAALIQA IPEIDPDRPL LGEPLQGEPP SPLNLPDGCA FHPRCRFARP TCSSVAPPTR HVGQQRYDCV LEAPVF
|
| |