Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4210 |
Symbol | nhaA |
ID | 3369750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5014645 |
End bp | 5015823 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654570 |
Product | pH-dependent sodium/proton antiporter |
Protein accession | YP_237278 |
Protein GI | 66047437 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.400142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAAC CCACCCCTCG TACCGAATCC CCGAATGCAC TGGCGTTCAT CACGCGTTTC TTCGCTGCTG AATCCGCTGG CGGGCTGGTG TTGATGGCAG CCGCGCTGGC GGCCCTGATC GTTGCCAACT CACCGCTGGG CGACAGCTAC TTCGCCGCGC TGCACGCAGT GTTCGCCGGT TTGTCGGTTT CGCACTGGAT CAACGACGGT CTGATGGCGA TCTTCTTCAT GCTCGTCGGC CTGGAGATCA AGCGCGAGGT GCTCGCCGGT CAGCTTGCCT CCTGGAGCCA GAGAGCCTTG CCGGGCTTTG CGGCGCTTGG CGGCATGCTG GTTCCGGCGC TGATCTACGT GGCCTTCAAC TGGGGGCGGC CAGACACCAT CGGCGGCTGG GCCATTCCGG CAGCGACCGA TATCGCGTTC GCCCTGGGTG TGCTGTCACT GCTGGGCAAG CGCGTGCCGC TGTCGCTTAA GATCTTCCTG TCGGCACTGG CGATTCTCGA TGATCTCGGC GCGGTGCTGA TCATCGCGTT GTTCTACACC AGCGATCTCT CCATTCCCAT GCTGCTCGCA GCGCTGGGCT CCATCGCCAT GCTCGTCGCG CTGAATCGTC TGGGTGTTAA AAAACTGCTG CCTTACCTCA TCGTCGGCGC GCTGCTGTGG TTTTTCATGC TCCAGTCCGG CATCCACGCC ACCCTCGCGG GCGTCGCGCT GGCGCTGTGC ATCCCGTTGG GCAAACCCGA TGAAGAGGCC CGCTCGCCGC TGCTGCACCT GGAAGAAAAG CTGCACCCAT GGGTGGCGTT TGCCGTCGTA CCGATCTTTG GTTTTGCCAA CGCTGGCGTG TCACTGTCGG GCATTACCGC CGACACGCTC GTGGACCCGG TCCCGCTCGG CGTTGCGCTA GGACTGCTGG TCGGCAAACA GGTCGGCATA TTCGCCATGG CCGCGCTGGC GATTCGCGCA GGCCTGGCGC GCTTGCCGGA TGGCAGCAAC TGGGGCCAGC TTTATGGCGT TGCAGCCTTG TGTGGTATCG GCTTCACCAT GAGCCTGTTC ATTGGCGCAC TGGCCTTCCC GGGCGCGCCG GAACTGGTCG ATGAGGTCAA GGTGGGCGTG CTGATCGGTT CGGTGTTGTC GGCTGTGCTG GGTGTGGTGG TGTTGCGCAG GTTTGCGCAG CGGGGGTGA
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Protein sequence | MHKPTPRTES PNALAFITRF FAAESAGGLV LMAAALAALI VANSPLGDSY FAALHAVFAG LSVSHWINDG LMAIFFMLVG LEIKREVLAG QLASWSQRAL PGFAALGGML VPALIYVAFN WGRPDTIGGW AIPAATDIAF ALGVLSLLGK RVPLSLKIFL SALAILDDLG AVLIIALFYT SDLSIPMLLA ALGSIAMLVA LNRLGVKKLL PYLIVGALLW FFMLQSGIHA TLAGVALALC IPLGKPDEEA RSPLLHLEEK LHPWVAFAVV PIFGFANAGV SLSGITADTL VDPVPLGVAL GLLVGKQVGI FAMAALAIRA GLARLPDGSN WGQLYGVAAL CGIGFTMSLF IGALAFPGAP ELVDEVKVGV LIGSVLSAVL GVVVLRRFAQ RG
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