Gene Psyr_4197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4197 
Symbol 
ID3369736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4993564 
End bp4995237 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content61% 
IMG OID637654557 
ProductDNA repair protein RecN 
Protein accessionYP_237265 
Protein GI66047424 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.312426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGC ACCTTTCCGT ACACAACTAC GCCATTGTCG AACACCTTGA TCTTGAACTG 
GATCGAGGCA TGAGCGTCAT CACCGGCGAA ACCGGCGCTG GCAAGTCGAT CATGCTCGAC
GCCCTGGGCC TGACCCTGGG CGACCGTGCC GACAGCGGCG TGGTCAGGCC CGGCGCCGAC
AAGGCCGACA TCCTGGCCAC GTTCGACCTG GGCGACATTC CCGAGGCACA GACCTGGCTC
AAAGAGCGCG ACCTGGACAA CGACGGCCCC TGCATCCTGC GCCGGGTCAT CACTGCCGAA
GGTCGGTCAC GCTCCTATAT CAATGGCTCA CCCTGCCCTC AGGGCGACCT GAAGGCGCTG
GGCGAACTGC TCATCGATAT TCACAGCCAG CATGAGCACC AGTCGCTGCT CAAGACCGAT
ACCCATCGGC GCCTGCTCGA CGAATACGCG GGTGCAACCG ATCTGGCCCG TCAGGTCCAT
CTCGCCGCGC AGCGCTGGCG GCAGACGCGG CAGGAGCTCG AGCGTCTTTC CAATTCGGGT
GACGAGCAAC GCGCACGGCA TCAGTTACTG AGCTATCAGC TCGAAGAGCT GGAAAGCCTG
AGCCTGGGCG AAAACGAGCT TGAACAGCTC GAACAGGAAC ACAAGGACCT GACCAACGCC
GAAAGCCTGC TGAGCATTTG CCGACAAGTG GTCGAGCAGT GCAGCGAAAG CGATTCCGGC
AACGTGCTCA ATGCCCTGAC CGCCAGCCTG CATCGTCTTG GCAGCGTCGA CCATTCCCCG
TCCGCCCTGA GCGAGGCCAC AGGGCTGCTG TCCAGCGCGC AGATACAGGT AGAAGAAGCG
GTAGGCGAGC TGAATCGCTT TTTGGATCAC TTCGATGCCG ACCCTGCCCG CCTGCAACAG
CTTGAAGAAC GTCTCGATGC CATTTACACA CTGGCGCGCA AGCACCGCAT CCAGCCAGGC
GAAGTGGCGA CACTGCAACA AAAGCTGCTG GATGAAATAG AAACGCTGAA TGCCAACGAC
GAATCCATCG AACGCCTGGA GCATGAAGTG CAGGCATTCG CCCGGCACTA TCAGGATAAA
GCCCGTGAGC TGAGCGACCT GCGCCACAAT TCGGCGACGA AACTGGCCAG CGCTGTGGAA
CAGGAAATTC ATCGTCTGGG CATGCCCGGC GGCCGTTTCC AGATCGACCT CAAAGCCAAC
GCCAGCGTAG AACCCTCGCC TCACGGCCTG GAGCAGGTGG AGCTACTGGT CAGCGCCAAC
CCCGGCCAAC CACTGAAAGC GCTGGCAAAA GTCGCGTCGG GGGGTGAACT GTCGCGCATC
AGCCTGGCGA TTCAGGTCAT CACTGCGCAA ACCTCGCGGG TACCGACGCT GGTATTCGAT
GAAGTGGATG TGGGGATTGG CGGACCGACC GCCGAGATCG TAGGGCAGCT GCTGCGTCGC
CTGGGCGAGC GCGGTCAGGT CATGACCGTC ACTCACCTGC CGCAGGTCGC GGCGCAGGGC
CATCAGCACC TGTTCGTGCA CAAGGTGCGC GACAACGACG CAACGCGCAC AGCGGTGTCC
AGGCTCAGCA AGACTGAACG TATAGAGGAA GTCGCCCGAA TGCTGGGCGG CATCGATCTG
ACCAAGGAAT CTCTGGCGCA CGCCAAAAAG ATGGTCGTTA CGGCGAAAAG CTGA
 
Protein sequence
MLVHLSVHNY AIVEHLDLEL DRGMSVITGE TGAGKSIMLD ALGLTLGDRA DSGVVRPGAD 
KADILATFDL GDIPEAQTWL KERDLDNDGP CILRRVITAE GRSRSYINGS PCPQGDLKAL
GELLIDIHSQ HEHQSLLKTD THRRLLDEYA GATDLARQVH LAAQRWRQTR QELERLSNSG
DEQRARHQLL SYQLEELESL SLGENELEQL EQEHKDLTNA ESLLSICRQV VEQCSESDSG
NVLNALTASL HRLGSVDHSP SALSEATGLL SSAQIQVEEA VGELNRFLDH FDADPARLQQ
LEERLDAIYT LARKHRIQPG EVATLQQKLL DEIETLNAND ESIERLEHEV QAFARHYQDK
ARELSDLRHN SATKLASAVE QEIHRLGMPG GRFQIDLKAN ASVEPSPHGL EQVELLVSAN
PGQPLKALAK VASGGELSRI SLAIQVITAQ TSRVPTLVFD EVDVGIGGPT AEIVGQLLRR
LGERGQVMTV THLPQVAAQG HQHLFVHKVR DNDATRTAVS RLSKTERIEE VARMLGGIDL
TKESLAHAKK MVVTAKS