Gene Psyr_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4139 
Symbol 
ID3369676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4928661 
End bp4929128 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content55% 
IMG OID637654497 
Producthypothetical protein 
Protein accessionYP_237207 
Protein GI66047366 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACC GTGCCATCGA AACCGGAGTC GGTCTGTTCC TGCTGGCGGG GATACTGGCT 
CTGCTCCTGC TGGCCCTGCG AGTCAGTGGT CTGAGCACAA GCGCGAGCAC CGACACCTAT
AAACTTTATG CCTACTTCGA CAATATTGCC GGTTTGACTG TCAGAGCCAA GGTAAGCATG
GCTGGCGTCA CGATCGGCAA GGTGACGGCG ATCGATCTGG ATCGCGATAC CTTTACCGGT
CGCGTCACGC TGGAGATTCA GAAGAAGGTC GATAACCTGC CTTCGGACTC GACTGCGTCG
ATTCTGACGG CTGGTTTGCT GGGTGAAAAA TACATCGGTC TCAGCGTCGG TGGTGATGAC
AAGCTGCTCA AGGATGGCGG GACTATCCAT GACACGCAGT CGTCGCTGGT GCTGGAAGAC
CTGATCGGAA AATTCCTGCT CAATACTGTT AGTAAAGACG CCAAGTGA
 
Protein sequence
MQNRAIETGV GLFLLAGILA LLLLALRVSG LSTSASTDTY KLYAYFDNIA GLTVRAKVSM 
AGVTIGKVTA IDLDRDTFTG RVTLEIQKKV DNLPSDSTAS ILTAGLLGEK YIGLSVGGDD
KLLKDGGTIH DTQSSLVLED LIGKFLLNTV SKDAK