Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4133 |
Symbol | hisD |
ID | 3369670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4923796 |
End bp | 4925142 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654491 |
Product | histidinol dehydrogenase |
Protein accession | YP_237201 |
Protein GI | 66047360 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.823119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTC CCACTGCAAT TCGCCGACTC GACGCTGCTG ACCCGGATTT CGCACGACAT CTGGATCATC TGCTGAGCTG GGAAAGTGTG TCTGACGATT CGGTCAACCA GCGCGTGCTC GACATCATCA AGGCGGTGCG TGAGCGTGGC GACGCGGCGC TGGTCGAGTT CACCCAGAAG TTCGACGGGC TGCAGGTCGC GTCGATGGCG GACCTGATCC TGCCTCGCGA GCGTCTGGAA CTTGCGTTGA CGCGCATTAC CCCGGGTCAG CGCGAAGCCC TGGAAAAGGC CGCCGAGCGT GTGCGCAGCT ACCACGAAAA GCAGAAGCAG GACTCCTGGA GCTACACCGA GGCCGACGGC ACGGTGCTGG GCCAGAAGGT TACGCCGCTG GACCGTGCAG GCCTGTACGT GCCGGGTGGC AAGGCTTCCT ACCCGTCGTC GGTTTTGATG AATGCCATAC CGGCCAAGGT GGCAGGTGTG ACCGAGGTGG TGATGGTCGT GCCTACGCCG CGTGGTGAAA TCAACGAGCT GGTGCTGGCC GCTGCCTGCA TTGCAGGTGT CGATCGGGTG TTCACCATCG GCGGTGCGCA AGCTGTTGCA GCGCTGGCTT ACGGTACTGA AAGCGTGCCG AAAGTCGACA AGGTGGTCGG CCCTGGCAAT ATCTATGTGG CGACCGCCAA GCGTCACGTG TTCGGTCAGG TGGGGATCGA CATGATCGCC GGTCCTTCCG AGATTCTGGT GGTGTGTGAC GGTCAGACCG ATCCTGACTG GATTGCCATG GACCTGTTCT CGCAGGCCGA ACACGACGAA GATGCCCAGG CCATCCTGGT CAGTCCGGAT GCCGAATTTC TCGACAAGGT GGCGGCCAGC ATCACCCGTC TGTTGCCGAC CATGGAGCGG GCGGCCATCG TCGAAACGTC GATCAACGGT CGCGGCGCGC TGATAAAGGT GGCTGACATG GCCCAGGCCA TCGAAGTCGC CAATCGCATT GCGCCCGAGC ACCTCGAACT GTCGGTCGCC GATCCGGAAG CCTGGCTGCC GCAGATTCGC CATGCGGGTG CGATCTTCAT GGGGCGTCAC ACCTCCGAAG CACTGGGCGA CTATTGCGCA GGTCCCAACC ACGTGCTGCC GACCTCCGGC ACGGCGCGTT TTTCCTCGCC GCTGGGCGTC TACGATTTCC AGAAGCGCTC GTCGATCATC TATTGCTCGC CGCAAGGTGC GTCCGAGCTG GGCAAGACGG CGTCCGTGCT GGCTCGTGGC GAATCCCTGA GCGGCCACGC GCGCAGTGCC GAATATCGAA TCACTGACCC TGACTGGACA GCAGGCAACA AAGAGGACGG CAAATAA
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Protein sequence | MTTPTAIRRL DAADPDFARH LDHLLSWESV SDDSVNQRVL DIIKAVRERG DAALVEFTQK FDGLQVASMA DLILPRERLE LALTRITPGQ REALEKAAER VRSYHEKQKQ DSWSYTEADG TVLGQKVTPL DRAGLYVPGG KASYPSSVLM NAIPAKVAGV TEVVMVVPTP RGEINELVLA AACIAGVDRV FTIGGAQAVA ALAYGTESVP KVDKVVGPGN IYVATAKRHV FGQVGIDMIA GPSEILVVCD GQTDPDWIAM DLFSQAEHDE DAQAILVSPD AEFLDKVAAS ITRLLPTMER AAIVETSING RGALIKVADM AQAIEVANRI APEHLELSVA DPEAWLPQIR HAGAIFMGRH TSEALGDYCA GPNHVLPTSG TARFSSPLGV YDFQKRSSII YCSPQGASEL GKTASVLARG ESLSGHARSA EYRITDPDWT AGNKEDGK
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