| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4130 |
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| Symbol | |
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| ID | 3369667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4919176 |
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| End bp | 4920336 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654488 |
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| Product | peptidase S1, chymotrypsin:PDZ/DHR/GLGF |
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| Protein accession | YP_237198 |
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| Protein GI | 66047357 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGG CACTGCGTTT TTTCGGCTGG CCATTGCTGG CTGGCGTGCT TATCGCCATG
CTGATTATTC AGCGCTATCC GCAGTGGGTC GGCCTGCCGA GCCTGGATGT CAATCTGCAA
CAGGCCCCGC AGACCACCAA TGTCATGCAA GGTCCGTCTT CCTATGCCGA CGCGGTCATT
GCCGCAGCGC CCGCGGTGGT CAACCTCTAT ACCACCAAGA TGGTCAACAA GGGCAACAAC
CCGCTTTTCG AAGACCCGCA GTTCCGACGC TTCTTCGGCG ATAACACGCC CAAGCAGAAG
CGCATGGAAT CGAGCCTGGG CTCTGGCGTC ATGATGAGCC CCGAAGGCTA CATACTGACC
AACAACCACG TCACCACCGG CGCTGACCAG ATCGTGGTCG CGCTCAAGGA CGGCCGTGAA
ACCATTGCCC GGGTCATCGG CAATGACCCG GAAACCGACC TGGCGGTGCT CAAGATCGAC
CTGAAAAATC TGCCGGCGAT TACCATCGCG CGCTCTGACA GCATCCGCAT CGGCGATGTT
GCGCTGGCGA TCGGCAACCC GTTCGGGGTC GGCCAGACCG TGACCATGGG CATCATCAGT
GCCACCGGGC GCAATCAGTT GGGCCTCAAC ACCTATGAAG ACTTCATTCA GACCGATGCG
GCCATCAACC CGGGTAACTC GGGCGGCGCA CTGGTGGACG CCAGCGGCAA CCTGATCGGT
ATCAATACCG CGATCTTTTC CAAGTCCGGC GGCTCGCAGG GCATCGGCTT CGCCATTCCG
ACCAAGCTGG CCATGGATGT CATGAAGTCG ATCATCGAGC ACGGTCAGGT CATTCGTGGC
TGGCTGGGCA TCGAAGTTCA ACCCCTGACT CAGGAACTGG CCGAATCCTT CGGACTGAAG
GATCGTCCAG GCATCGTTGT GGCGGGCATC TTCCGCGACG GCCCGGCGCA GAAAGCCGGA
CTGCAACTGG GTGACGTGAT CCTGAGCATC AATGGCGAAC CTGCCGGCGA CGGGCGTCGT
TCGATGAACC AGGTGGCGCG CACCAAACCC AAGGACAAGA TTGCTATCGA CGTGATGCGC
AACGGCAAGG AAATGCGCCT GAGCGCCGAA GTCGGCCTGC GTCCACCGCC CGCCCCTACC
CCGGTTGCAG CGCCGGAGTG A
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| Protein sequence | MFKALRFFGW PLLAGVLIAM LIIQRYPQWV GLPSLDVNLQ QAPQTTNVMQ GPSSYADAVI
AAAPAVVNLY TTKMVNKGNN PLFEDPQFRR FFGDNTPKQK RMESSLGSGV MMSPEGYILT
NNHVTTGADQ IVVALKDGRE TIARVIGNDP ETDLAVLKID LKNLPAITIA RSDSIRIGDV
ALAIGNPFGV GQTVTMGIIS ATGRNQLGLN TYEDFIQTDA AINPGNSGGA LVDASGNLIG
INTAIFSKSG GSQGIGFAIP TKLAMDVMKS IIEHGQVIRG WLGIEVQPLT QELAESFGLK
DRPGIVVAGI FRDGPAQKAG LQLGDVILSI NGEPAGDGRR SMNQVARTKP KDKIAIDVMR
NGKEMRLSAE VGLRPPPAPT PVAAPE
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