Gene Psyr_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4087 
Symbol 
ID3369623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4872975 
End bp4873454 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID637654445 
Productputative nucleotide-binding protein 
Protein accessionYP_237155 
Protein GI66047314 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.568883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCGT TCGACGTAGT GTCCGAATTG GATAAACACG AAGTCACGAA TGCCGTCGAC 
AACGCTATCA AAGAGCTGGA CCGTCGCTAT GACCTGAAAG GCAAAGGCAC GTTCGAGTTC
AAGGAACTGA CTGTCACGCT GACCGCAGAA GCAGACTTCC AGCTGGAGGC CATGATCGAA
ATCCTCAAGC TGGCGCTGGT CAAACGCAAG ATCGACGCGA AGTGCCTCGA GATCAAGGAC
GCCTACGCCT CCGGCAAATT GATGAAGCAG GAAGTCATCC TCCGTGAAGG CATCGACAAG
GAGCTGGCGA AGAAAATCGT CGCCCATATC AAGGAAGCCA AACTCAAGGT CCAGGCCGCC
ATTCAGGGCG AGCAGGTGCG GGTGACCGGC AAGAAGCGCG ACGACCTGCA AGAAGCCATC
GCAGCGTTGC GTGCCTACGA TTCGGGCATG CCGTTGCAAT TCAACAACTT CCGCGACTGA
 
Protein sequence
MPSFDVVSEL DKHEVTNAVD NAIKELDRRY DLKGKGTFEF KELTVTLTAE ADFQLEAMIE 
ILKLALVKRK IDAKCLEIKD AYASGKLMKQ EVILREGIDK ELAKKIVAHI KEAKLKVQAA
IQGEQVRVTG KKRDDLQEAI AALRAYDSGM PLQFNNFRD