Gene Psyr_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4084 
Symbol 
ID3369620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4869754 
End bp4871292 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content53% 
IMG OID637654442 
Producthypothetical protein 
Protein accessionYP_237152 
Protein GI66047311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTC GTGACATACA CTCAGTGACA CGCTGGGGCA TTGCCGCTAT TTTTGGCACT 
GTACTGCTGA CCTATAGTGG TCACTGGTGG GGCAAGGCCA TTGCTCATGA AAAAGCTGAA
CTAATAGCTT ATAAATCCAA AGTCGCAGAG CAAGTATTAG AGCAGCAGGC GACTCAGAAG
CGAAACTACG CCCTGGAAAT TCGGGGATTA GGTATCGCTA TCAATGACTG GCATCAATCG
TCTATTTGGC GAGAAATAGT TAAGAAAAAC AGTAACCTTG CCTCAATATA CTCATCAAGA
CCAGAAGATT ATGATTCTGA CTTGAGTTCA CGCGAGATTA CTAGAGATAT TAATATACGT
GTAGCCTTTC AACATTCTGC GGGAGAGTCA GTTGCATATT GGCCAACACC TACTTTTGCG
TTAGGCCCTC CAAACCCATA TGAAAAGCCC TACAAAGCGG CAGGCTTGAT CAATTCTGGA
CGTAACAAAG CGACCTTGGG TGTAGCACAA TTTTTATGGC AAGAAGATGA GAGCACTAGT
CAAGCGCAGG CTATGATCGA AAAGCTTTAT CACTTCTTTG ACGGTAACCC GCAGGTGCCT
CAAGCACTAA TAGCAAGCCG GGACGGCGAT GTAACGAGAG CTGTTTATCG CAAACGCGGT
ACGCCCGGCC TCCAAAGCGC TCAAGTCGTA CCGACTGTTT TCGAAAGCAT GACTGGACTC
TTGGTCACCC GTTCGGATCG CGTAGATCGC TTTATCAGAC CCTACGCGGT CAATGAGGCA
GAAGACAACC AAAACAAAAA TACTGACTTG GGTAAGCTCT GGGCATTCTA CTGGGATCGC
GACAACGCGT TCATAGACTG GTACGAAAAT GCCGAGAAAG CCAAAGGAGT TAAAGATCCA
TTAGCCCCCG GCACCATGTC CACCGCCTAC TGGCAATCCC AACTCCCCAC CCTCTGGAAA
ACCATCAGCA ACCGTGGTCC CGGCAACTTC GAGCCTTCCC CTTGGCTGCC GATCCGCTGG
AATCAGCATC AGGTCAAGGA GTTCGACGCT GCGCCGGTAC TCGGCTATCT GCATCGCCCG
ATCAAGGCGC CCATGCAGGA TGAAAACGGC AAGCGTCTGA AACCGGCCTT GCAAGCCAAA
GCGTTGCAAG CCGCCTGGGT GCAGGCGCTG GATACCTTGC CAGATGGTCA GAAACCTGTG
CGGGTGTTCT ACGACAGCAC CAACAACCCG GAAGCGGAAA TCGCCCTGAA CAACGCCCTG
CACGACCTGA ACAAGGACGG CCACGGTCTT GAGCTCGGCA ATGTCGAAGA AGGCTACGAC
ATCGGCCGTC GTCTGGGGAA TACCGGAGTT AGTGGTGCGC TGGTCGAGAT CAATCTGGCG
ACCATCGCCA GTTACAAGGA TGGCGGCGTC AGCGCCGTGG TCTACGCCGG CACCGATGGC
AGCCTGACCG TACAAATGGT CCGCCCGCCC GATGAAGCCC GCAAAGCGAA GAACAGCCAG
AACCGCGGCG CAGATCCGTT CACCTTCGGC TCGCCTTAG
 
Protein sequence
MEFRDIHSVT RWGIAAIFGT VLLTYSGHWW GKAIAHEKAE LIAYKSKVAE QVLEQQATQK 
RNYALEIRGL GIAINDWHQS SIWREIVKKN SNLASIYSSR PEDYDSDLSS REITRDINIR
VAFQHSAGES VAYWPTPTFA LGPPNPYEKP YKAAGLINSG RNKATLGVAQ FLWQEDESTS
QAQAMIEKLY HFFDGNPQVP QALIASRDGD VTRAVYRKRG TPGLQSAQVV PTVFESMTGL
LVTRSDRVDR FIRPYAVNEA EDNQNKNTDL GKLWAFYWDR DNAFIDWYEN AEKAKGVKDP
LAPGTMSTAY WQSQLPTLWK TISNRGPGNF EPSPWLPIRW NQHQVKEFDA APVLGYLHRP
IKAPMQDENG KRLKPALQAK ALQAAWVQAL DTLPDGQKPV RVFYDSTNNP EAEIALNNAL
HDLNKDGHGL ELGNVEEGYD IGRRLGNTGV SGALVEINLA TIASYKDGGV SAVVYAGTDG
SLTVQMVRPP DEARKAKNSQ NRGADPFTFG SP