Gene Psyr_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4048 
Symbol 
ID3369584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4831826 
End bp4832581 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID637654406 
Producthypothetical protein 
Protein accessionYP_237116 
Protein GI66047275 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA TCGCCCGCAT TCGTGACAAC ACTTCTGAAC GTCGTCTTCA GGCCGAGCGC 
CTGATTGGAG CGCGCGCCTT GCAGGAAGCA CAGGCGTTGC GTTTCAGTGT GTTCAGCGAA
GAGTTCAACG CTCGTCTCAA CGGCGCGGAA CAAGGCCTGG ACATCGACGA TTACGATGTT
CACTGCTCGC ACATCGGGGT ACGCGACCTG AACACCGGGC GTCTGGTTGC CACGACCCGG
CTGCTCGACC ACCAGGCCGC CAACACGCTG GGGCGCTTCT ACAGCGAAGA AGAGTTCAGC
CTGCACGGGC TGGTCAATCT GCAAGGGCCG ATCCTCGAAC TGGGTCGCAC CTGCGTCGAT
CCGGCCTACC GCAACGGCGG CACCATTGCG GTGTTGTGGA GCGAACTGGC CGAGGTGCTC
AACGAAGGCG GCTACAGCTA CCTGATGGGC TGCGCGAGCA TCCCGATGCA GGACGGCGGT
ATTCAGGCCC ATGCGATCAT GCAACGCCTG CGCGAACGCT ACCTGTGCAA CGAGCACCTG
CGCGCCGAAC CGAAGAATCC GCTGCCGACC CTCGACATCC CGAGCAATGT GATCTGCGAG
ATGCCACCGC TGCTCAAGGC CTACATGCGT CTGGGGGCCA AGATCTGTGG CGAACCGTGC
TGGGACGAAG ACTTCCAGGT GGCCGACGTG TTCATCCTGC TCAAGCGCGA CGACCTGTGC
CCGCGCTATG CCCGCCACTT CAAGGCGGCC GTGTGA
 
Protein sequence
MTQIARIRDN TSERRLQAER LIGARALQEA QALRFSVFSE EFNARLNGAE QGLDIDDYDV 
HCSHIGVRDL NTGRLVATTR LLDHQAANTL GRFYSEEEFS LHGLVNLQGP ILELGRTCVD
PAYRNGGTIA VLWSELAEVL NEGGYSYLMG CASIPMQDGG IQAHAIMQRL RERYLCNEHL
RAEPKNPLPT LDIPSNVICE MPPLLKAYMR LGAKICGEPC WDEDFQVADV FILLKRDDLC
PRYARHFKAA V