Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4048 |
Symbol | |
ID | 3369584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4831826 |
End bp | 4832581 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654406 |
Product | hypothetical protein |
Protein accession | YP_237116 |
Protein GI | 66047275 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA TCGCCCGCAT TCGTGACAAC ACTTCTGAAC GTCGTCTTCA GGCCGAGCGC CTGATTGGAG CGCGCGCCTT GCAGGAAGCA CAGGCGTTGC GTTTCAGTGT GTTCAGCGAA GAGTTCAACG CTCGTCTCAA CGGCGCGGAA CAAGGCCTGG ACATCGACGA TTACGATGTT CACTGCTCGC ACATCGGGGT ACGCGACCTG AACACCGGGC GTCTGGTTGC CACGACCCGG CTGCTCGACC ACCAGGCCGC CAACACGCTG GGGCGCTTCT ACAGCGAAGA AGAGTTCAGC CTGCACGGGC TGGTCAATCT GCAAGGGCCG ATCCTCGAAC TGGGTCGCAC CTGCGTCGAT CCGGCCTACC GCAACGGCGG CACCATTGCG GTGTTGTGGA GCGAACTGGC CGAGGTGCTC AACGAAGGCG GCTACAGCTA CCTGATGGGC TGCGCGAGCA TCCCGATGCA GGACGGCGGT ATTCAGGCCC ATGCGATCAT GCAACGCCTG CGCGAACGCT ACCTGTGCAA CGAGCACCTG CGCGCCGAAC CGAAGAATCC GCTGCCGACC CTCGACATCC CGAGCAATGT GATCTGCGAG ATGCCACCGC TGCTCAAGGC CTACATGCGT CTGGGGGCCA AGATCTGTGG CGAACCGTGC TGGGACGAAG ACTTCCAGGT GGCCGACGTG TTCATCCTGC TCAAGCGCGA CGACCTGTGC CCGCGCTATG CCCGCCACTT CAAGGCGGCC GTGTGA
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Protein sequence | MTQIARIRDN TSERRLQAER LIGARALQEA QALRFSVFSE EFNARLNGAE QGLDIDDYDV HCSHIGVRDL NTGRLVATTR LLDHQAANTL GRFYSEEEFS LHGLVNLQGP ILELGRTCVD PAYRNGGTIA VLWSELAEVL NEGGYSYLMG CASIPMQDGG IQAHAIMQRL RERYLCNEHL RAEPKNPLPT LDIPSNVICE MPPLLKAYMR LGAKICGEPC WDEDFQVADV FILLKRDDLC PRYARHFKAA V
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