Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3988 |
Symbol | |
ID | 3369524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4746168 |
End bp | 4747388 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637654346 |
Product | hypothetical protein |
Protein accession | YP_237056 |
Protein GI | 66047215 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.582259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTCA TTACCTCCAC GTCACCCATC GCTGCGACCG ATCACCTCGC GCAGTTCCTT GGCCTGCTGG ACATCAGCCT GTCGCAGAAC TCGCTGATCA AGCTGGTCCT GGCCAAATAC GTGGGCAGCG AAGCCGACTT GCAGCGGATC ATCATCAAGC CGCTGACCGT CAAGGAACAA CCGTGCCTGA GCTTCGTGTA TCGCTACAAG ACTCGTGACA TCACCAAGAA TTTTTCGCTT GCTGAAGCGG TGGCTGTCAT TGCCAGCCTG ATTCCGGCGT CCTTCAAGAA TGCGCACCTG TTGTCGCTGA CCGACGAGGT GCAGTTGGAG TTCAGCAAGA AGGGCAAGAC GACGCTGTTC AAAAGCAAGG CTCAGCAGGA GCGCCAGGCT CCTTCGGCCG GGCATGACCG CGAGAAGAAA CGCTACCTGG AGCTTACCCG GCCATTCCTG ACTGACTTGG GTGTGACCAA TCGCCAGCAT GAGCTGATTC CGGCCATGTC GCGCAAATGG AAGCAGATTA ACAAGTTCAT CGAAGTGTTT TCCCATGCAC TGAGCTCATC GCCGCTCAAG CTCGATCAGC CGATCAAGGT TGCGGACTTC GGCTCAGGCA AGGGTTATCT GACCTTCGCC ATCCACGACT ACCTGTGCAA CACCTTGCAG GCGCAAGGGC AGGTGACCGG TGTCGAGCTG CGCGAAGACA TGGTCACGCT GTGCAACGAG GCGGCGGCGA AGCTCGATCA TCCGGGGCTG ACCTTTGCGC AGGGTGACGT GCGTACAGTG GCGCCCAGCG CGCTGGACGT GATGATTGCG CTGCACGCCT GTGATATCGC GACAGACTAC GCCATTCATA TGGGCATTCG CTCCGGCGCC TCGATCATCA TGTGCTCGCC GTGCTGCCAC AAACAGATCC GCTTGCAGAT CCAGAGCCCG ACGCTGTTGA AACCGATGCT GCAATACGGT CTGCACATGG GCCAGCAGGC AGAAATGGTC ACCGACAGCC TGCGCGCGCT ATTGCTGGAA GCATGCGGTT ACGAGACCAA AGTGTTCGAG TTCATCTCGC TGGAGCATAC CAACAAGAAC AAGATGATCC TCGCGGTCAA GCGTGCCGAG CCGGTCGATC CGGCTCAGTT ACTGGCGCGC ATTCAAGAGC TCAAAACGTT CTACGGCCTC AGCGAGCATT GCCTGGAAAC GCTGCTCAAG GGCGACGGCT TTATTGGCTG A
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Protein sequence | MSVITSTSPI AATDHLAQFL GLLDISLSQN SLIKLVLAKY VGSEADLQRI IIKPLTVKEQ PCLSFVYRYK TRDITKNFSL AEAVAVIASL IPASFKNAHL LSLTDEVQLE FSKKGKTTLF KSKAQQERQA PSAGHDREKK RYLELTRPFL TDLGVTNRQH ELIPAMSRKW KQINKFIEVF SHALSSSPLK LDQPIKVADF GSGKGYLTFA IHDYLCNTLQ AQGQVTGVEL REDMVTLCNE AAAKLDHPGL TFAQGDVRTV APSALDVMIA LHACDIATDY AIHMGIRSGA SIIMCSPCCH KQIRLQIQSP TLLKPMLQYG LHMGQQAEMV TDSLRALLLE ACGYETKVFE FISLEHTNKN KMILAVKRAE PVDPAQLLAR IQELKTFYGL SEHCLETLLK GDGFIG
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