Gene Psyr_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3969 
Symbol 
ID3369504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4716945 
End bp4717979 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content64% 
IMG OID637654326 
Productputative ammonia monooxygenase 
Protein accessionYP_237037 
Protein GI66047196 
COG category[R] General function prediction only 
COG ID[COG3180] Putative ammonia monooxygenase 
TIGRFAM ID[TIGR03082] membrane protein AbrB duplication 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.997926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT CCTCTCTGCG CCAATGGTGG GCAACACCGT TGATCGGCCT GCTGGGCGGC 
TACCTCGCCA GCCAGGTCGG CTGGCCGTTG CCGTGGATGG TGGGCTCGTT GCTGGCAATC
ATCCTGGTGC GCTGCCTGAC ACCCTGGCAG CTGGCGCAGA TTCCCGGCGG GCGCAAGTGT
GGTCAGCTGA TCATCGGGAT CGGCATCGGC CTGCACTTCA CCCCGGTAGT CATCGAACAG
GTACTGGCGC ATTTCGGGCT GATTTTCATC GGTGCGCTGG TTACCAGTCT GTCGTGTCTG
GTCGGCGTGT GGCTGATGCT GCGTACCGGA GAGGATCGCC CTACGGCGTT CTTCTCCAGC
ATGCCGGGCG GTTCCGGGGA GATGGTCAAC CTCGGCGCTC GTAACGGTGC AACGCTGAGC
AGTGTCGCGG CCGCACAAAG TCTGCGGGTA CTTGCCGTCG TGCTGTGCGT GCCGGCGATC
TTCAAATACC TATTGGGTGA TGGCGCACCC GCGTTGCATG CCAGCGTCGT CGACTGGCGC
TGGCTGGCCG TTCTGTTGCC GCTCGGTGCC GCGCTGGCCT GGCTGTGGCA ACATCTCAAG
CAGCCCAATC CCTGGCTGTT CGGCCCGCTG CTGCTCAGTG CCGTGGTGAG CGTGGTCTGG
GACTTGAAAA TCGGCCTGCC CAACGGTGCC AGCCAGCTTG GCCAGTTGCT GATCGGCAGC
GGGCTGGGTT GTCATTTCAA TCGGGAGTTC TTTCGGCGTG CGCCATCGTT CCTGGCGCGC
ACGCTGCTGG GCACTGCGCT GACCATGCTG ATCGCCGCGC TGGCGGCACT GGCGCTGAGC
GCCCTCACCC ACCTGGACCT GCGTTCACTG ACGCTGGGCA TGATGCCCGG CGGCATCGCA
GAAATGAGCC TGACCGCCGA AGTGCTGCAA CTGTCGGTGC CGCTGGTCAC GGCCATGCAG
GTCATGCGCC TGCTGTTCGT GCTGTTTCTC GCCGAGCCGC TGTACCGACG CTGGAACAAA
CGGCTCGCTG ACTGA
 
Protein sequence
MADSSLRQWW ATPLIGLLGG YLASQVGWPL PWMVGSLLAI ILVRCLTPWQ LAQIPGGRKC 
GQLIIGIGIG LHFTPVVIEQ VLAHFGLIFI GALVTSLSCL VGVWLMLRTG EDRPTAFFSS
MPGGSGEMVN LGARNGATLS SVAAAQSLRV LAVVLCVPAI FKYLLGDGAP ALHASVVDWR
WLAVLLPLGA ALAWLWQHLK QPNPWLFGPL LLSAVVSVVW DLKIGLPNGA SQLGQLLIGS
GLGCHFNREF FRRAPSFLAR TLLGTALTML IAALAALALS ALTHLDLRSL TLGMMPGGIA
EMSLTAEVLQ LSVPLVTAMQ VMRLLFVLFL AEPLYRRWNK RLAD