Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3949 |
Symbol | recO |
ID | 3369484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4697047 |
End bp | 4697730 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654306 |
Product | DNA repair protein RecO |
Protein accession | YP_237017 |
Protein GI | 66047176 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CCACCGGCCA ACCTGCTTAT GTGCTCCACA GTCGTGCGTA TCGCGAAAAC AGCGCGCTGG TCGACTTCCT CACGCCTCAG GGCCGTCTGC GTGCCGTGCT GCGCAGTGCC AAGGGCAAGG CGGGTTCGCT GGCACGCCCG TTCGTGCCCC TCGAGGTCGA GTTTCGAGGG CGGGGCGAGC TGAAGAATGT CGGCCGCATG GAAAGCGCGG GCGTCGCCAC CTGGATGACC GGCGAGGCGC TGTTCAGCGG CATGTACCTC AACGAACTGC TGATTCGCCT GTTGCCTGCC GAAGACCCTC ATCCTGCGGT GTTCGAACAT TACGCTGCCA CGCTGCTGGC CCTTGCTCTG GGGCGTCCGC TGGAGCCGTT GCTGCGTTCG TTCGAATGGC GGTTGCTGGA TGACCTGGGC TATGGCTTCG CGATGGACGC CGACATCAAC GGCGAACCGC TGGCCATTGA TGGCATGTAT CGCCTGCAGG TCGATGCCGG GCTCGAGCGT GTGTACCTGC TTCAGCCCGG TCTGTTTCAG GGCGCGGAAT TACTGGCCAT GTCCGAAGCC GACTGGAGCG TCCCGGGCGC GTTGTCCGCT GCCAAGCGCC TGATGCGTCA GGCGCTGGCA GTTCACTTGG GCGGTCGCCC TTTAGTCAGT CGTGAACTGT TTCGCAAGCC TTGA
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Protein sequence | MSTPTGQPAY VLHSRAYREN SALVDFLTPQ GRLRAVLRSA KGKAGSLARP FVPLEVEFRG RGELKNVGRM ESAGVATWMT GEALFSGMYL NELLIRLLPA EDPHPAVFEH YAATLLALAL GRPLEPLLRS FEWRLLDDLG YGFAMDADIN GEPLAIDGMY RLQVDAGLER VYLLQPGLFQ GAELLAMSEA DWSVPGALSA AKRLMRQALA VHLGGRPLVS RELFRKP
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