Gene Psyr_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3946 
Symbol 
ID3369481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4694539 
End bp4695282 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID637654303 
Productmethyltransferase 
Protein accessionYP_237014 
Protein GI66047173 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR00740] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAAG AAACCGACCG CATTTTCGCC CAGCCGCTGT CCCAGGTACC TGACTTCGCC 
TTCAACGAAG ACGTGGTGCG GGTATTCCCG GACATGATCA AACGCTCGGT GCCCGGTTAT
CCGACGATTG TCGAAAACCT CGGTGTCTTG GCCGCGCAAT TTGCCCAGCC AAACACAGTG
CTCTATGACT TGGGCAGTTC TCTGGGCGCC GTCACCCAGG CCCTGCGCCG CCATGTGCGT
GGCGAGGGTT GTGAGGTCAT CGCGATAGAC AACTCCAGTG CCATGGTCGA GCGTTGCCGT
GAATACCTCA ACGCGCAGGA CTCCATGTTT CAGGAGTTGT TGCCGGTGCA GGTGCTCGAA
GGCGACATCC TCGCGCTGGC GTTCAAACCG GCCTCGGTGG TGGCGCTGAA CTTCACCCTG
CAATTCATCG CTCCCGAACA GCGCCTGGCA TTGCTCGGGC GCATTCGTGA TGCACTGGTG
CCCGGCGGCG CGCTGATTCT CTCGGAAAAG CTGCGCTTCG ATGACCCGCA GGAACAGGCG
CTGCTGACCG ACCTGCACAT CGCCTTCAAA CGCGCCAACG GCTACAGCGA CCTGGAAATT
GCCCAGAAGC GCAGCGCCAT CGAAAACGTC ATGAAACCCG ACAGCCTCGA AGAACACCGC
CAACGCCTGC TTGCCGCAGG TTTTTCCAAG GTGGTGCCCT GGTTTCAATG CCTTAACTTC
ACCTCGTTGA TTGCCCTGCC ATGA
 
Protein sequence
MSKETDRIFA QPLSQVPDFA FNEDVVRVFP DMIKRSVPGY PTIVENLGVL AAQFAQPNTV 
LYDLGSSLGA VTQALRRHVR GEGCEVIAID NSSAMVERCR EYLNAQDSMF QELLPVQVLE
GDILALAFKP ASVVALNFTL QFIAPEQRLA LLGRIRDALV PGGALILSEK LRFDDPQEQA
LLTDLHIAFK RANGYSDLEI AQKRSAIENV MKPDSLEEHR QRLLAAGFSK VVPWFQCLNF
TSLIALP