Gene Psyr_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3927 
Symbol 
ID3369462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4671508 
End bp4672275 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content62% 
IMG OID637654284 
Productsiderophore-interacting protein 
Protein accessionYP_236995 
Protein GI66047154 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.179382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAC AGCAGTCAAT CCATCGTGTC ATGCATGAAA TCAAGCGACG CAAGCTGCAG 
GTGGTGCGGG TCACGGAGCT GACACCCCTG ATGCGCCGCA TTACCTTGCA GGGGCCGGAG
CTGGCGGGTT TCATCAGCCT GGGCACGGAT GACCACGTCA AACTGTTCTT CCCGCAGACG
GCAGAAGAAC AGGCCGCGCT GGAAAACCTC AACCCTGCCG CCGACAAGGA CACGCCGCGC
CCGCCGATGC GCGATTACAC GCCGCGTCGC TACGACGAAA AAACCGGGGA ACTGGATATC
GATTTCGTGC TGCATGGCGA AGGCCCGGCG ACCACTTGGG CCGCTCAGGC AGCGCCCGGG
CAATTCCTGC ACATCGCCGG GCCAAAGGGT TCGATGGTGG TGCCGGACAT GTTCGACAGC
TACCTGCTGA TCGGCGACGA AACAGCCATT CCCGCCATCG CCCGACGCCT CGAAGCGCTG
CCCGCCAACC GCGCTGCGCT GGTGGTGGTC GAAGTGGCCA ACCCGCAGGA ACAGCAGGTG
TTCGACAGCG CTGCGCAGGT CGACGTGATC TGGATTGTAC GCGGCGAACA GAATCTGCTG
GACGTCACGC GGCGCCTGGA GATGCCCGAG GGCAAGCTGT ACGCCTGGGT CGCGACCGAA
TCCGCGCTGT CACGCAAGCT ACGTCGTGTA CTGCTCGACG AGTTCGGCCT GGAAGAGGAA
TTCGTCAAGG CTGCCGGTTA CTGGAAGCTG GACAGCACAG AAGAATGA
 
Protein sequence
MNSQQSIHRV MHEIKRRKLQ VVRVTELTPL MRRITLQGPE LAGFISLGTD DHVKLFFPQT 
AEEQAALENL NPAADKDTPR PPMRDYTPRR YDEKTGELDI DFVLHGEGPA TTWAAQAAPG
QFLHIAGPKG SMVVPDMFDS YLLIGDETAI PAIARRLEAL PANRAALVVV EVANPQEQQV
FDSAAQVDVI WIVRGEQNLL DVTRRLEMPE GKLYAWVATE SALSRKLRRV LLDEFGLEEE
FVKAAGYWKL DSTEE