| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3926 |
|---|
| Symbol | |
|---|
| ID | 3369461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4670921 |
|---|
| End bp | 4671511 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637654283 |
|---|
| Product | transcriptional regulator PadR-like |
|---|
| Protein accession | YP_236994 |
|---|
| Protein GI | 66047153 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.171272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAG ATAAACATCC ACCCCACCAT CGTCCGCCGC ATCTTCGTGA AGCAGGTGAA
GATCGCGACG GTTTTGAAAA ACGTCCAGGC CGCGAACGCG GTGGACGTGG CCCACGGGTT
TTCGCCCCTG GCGATCTGAA ATTGCTGCTA TTGGCGTTGA TCGCCGAACA GCCCGCCCAC
GGCTATGACC TGATCCGCAA GATCGAAGGT TTGTTCGAGG GGGCGTACTG CCCCAGCCCC
GGCGTTATCT ACCCCACCCT GACGTTTCTT GAAGAAAGCG AAATGGTGGC CGGCGATGCC
CAGGCCGGCA AAAAACTCTA CACCGTCACC GATGCGGGTC GCCAATCCCT GGAAGATCAG
GCCGTGGCGC TGGAAGGTGT GCGCATGCGC ATCGATGTCA GCAAGCGCTC ACTGCGCGGC
CATGACCGTC CGCCGGAAAT CCATGAAGCG GTGCACAACC TGCGCCACGC GCTGCAGATG
CACCATGGCC GCTGGAGCCC GGAAGAGATT CTGCGGGTCA GCGAACTGCT CAACAGCACG
GCCAGGGCGG TCGTCGATGG GCCCCAACCT GCCTCGGAGG AGTCGGCATG A
|
|---|
| Protein sequence | MREDKHPPHH RPPHLREAGE DRDGFEKRPG RERGGRGPRV FAPGDLKLLL LALIAEQPAH
GYDLIRKIEG LFEGAYCPSP GVIYPTLTFL EESEMVAGDA QAGKKLYTVT DAGRQSLEDQ
AVALEGVRMR IDVSKRSLRG HDRPPEIHEA VHNLRHALQM HHGRWSPEEI LRVSELLNST
ARAVVDGPQP ASEESA
|
|---|
| |