| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3911 |
|---|
| Symbol | |
|---|
| ID | 3369446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4653606 |
|---|
| End bp | 4654340 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637654268 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_236979 |
|---|
| Protein GI | 66047138 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.357859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.229432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCA TCAAAAACGT CAACAAGTGG TATGGGGACT TCCAGGTACT GACCGATTGC
AGCACCGAGG TCAGCAAGGG CGAAGTGGTG GTGGTGTGCG GCCCGTCCGG CTCGGGCAAA
TCGACCCTGA TCAAATGCGT GAACGCGCTG GAGCCGTTTC AGAAAGGCGA GATCGTCGTC
GACGGCACAT CGATCTCCGA CTCGAAGACC AACCTGCCGA AACTCCGCTC GCGGGTGGGC
ATGGTGTTTC AGCACTTCGA ACTGTTTCCG CACCTGAGCA TTGTCGAAAA CCTGACCATC
GCGCAGATCA AGGTGCTGGG CCGCAGCAAG GCCGAAGCCA CCGAGAAGGG TCTGAAGCTG
CTTGAGCGCG TCGGTCTTTC CGAGCATGCG CACAAGCATC CCGGCCAGCT TTCCGGTGGG
CAGCAACAGC GTGTCGCCAT CGCGCGCGCG CTGGCGATGG ACCCGGTGGT CATGCTGTTC
GACGAGCCCA CGTCCGCGCT CGACCCGGAA ATGGTCAATG AAGTGCTCGA TGTGATGGTG
CAACTGGCCC AGGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG TTTCGCGCGC
AAAGTCGCCA ACCGGGTGAT TTTCATGGAC AAGGGGCAGA TCGTCGAAGA CTGCGCCAAG
GAAGAGTTTT TCGGTGACGT GAGCGCACGC TCGGAACGCG CTCAGCAATT CCTCGCCAAG
ATTCTTCAGC ACTAG
|
|---|
| Protein sequence | MISIKNVNKW YGDFQVLTDC STEVSKGEVV VVCGPSGSGK STLIKCVNAL EPFQKGEIVV
DGTSISDSKT NLPKLRSRVG MVFQHFELFP HLSIVENLTI AQIKVLGRSK AEATEKGLKL
LERVGLSEHA HKHPGQLSGG QQQRVAIARA LAMDPVVMLF DEPTSALDPE MVNEVLDVMV
QLAQEGMTMM CVTHEMGFAR KVANRVIFMD KGQIVEDCAK EEFFGDVSAR SERAQQFLAK
ILQH
|
|---|
| |