| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3873 |
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| Symbol | |
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| ID | 3369408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4613364 |
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| End bp | 4615067 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654230 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_236941 |
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| Protein GI | 66047100 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.537943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT TTGCTGAACT CTACGCACAG CTGGACGCGA CCACTTCCAG CAACGCCAAA
CTCGCCGCAA TGCGCGACTA CTTCGAAAAG GCGGCAGCAG AGGACGCCGC CTGGGCGGTG
TACTTTCTGT CAGGCGGCCG CCCACGGCAA CTGGTGCCGA CCCGTGTACT GCGCGAACAG
GCCATGACCC TGGCAAGTCT GCCGGAATGG CTGTTCGAAG AGAGCTATCA GGCGGTCGGC
GACCTGGCGG AAACCCTGTC GCTGTTACTG CCCCAGGCCG ACCACAGTAA TGACGAAGGT
CTGGCCACCT GGATGGAAGA CAAGCTGTTG CCGTTGCGCG GCCTGCCGCC TGAAGAACTT
GCCGAGCGGC TGCCGATGTT CTGGTCGCAG TTGGACCGCA GCAGTCTGAT GGTCTGCATC
AAGCTGATCA CCGGCAGTTT CCGGGTCGGC GTGTCGAAGC TGCTGGTCAC CCGTGCGCTG
GCGGCGCTGG CAGATATCGA CAGCAAACGC GTCGCACAAC GGCTGGTGGG CTACACCGAT
CTATCGCACC GGCCCAGCGC CGAACGCTAT TTGAAGCTGA TCGCGCCGGA ATCCGAGGAT
GAGCACGCCC AACGCGGCGG CCAGCCCTAC CCGTTTTTTC TCGCCCACTC CCTGCAACAG
CCCGCCGATC AGTTTGAGGC GTTGCTCGGT CCGGCGCAGA ACTGGCAGGT GGAATGGAAG
TGGGACGGCA TTCGCGCGCA ACTGGTCAAA CGCGACGGGC GCTTGTGGAT CTGGTCACGC
GGCGAAGAAC TGGTGACCGA CCGTTTTCCG GAGCTGCACA GCCTGGTGCA GTGCCTGCCG
GACGGTACGG TGATCGACGG CGAAATCGTG GTCTGGAAAG CCCCCGATGC GAACCCCGAT
GCCGATGCGG AGTTTGCCTT GAACAGCGAT GCTCCTGCGG CTGCGCCTTC AGTCCAACCG
TTCGCCCTGC TGCAACAGCG CATAGGCCGG AAGACGCTGG GGAAAAAGAT TCTTGCCGAC
GTTCCGGTCG TGGTGCTCGC CTATGACCTG CTGGAGTGGC AAGGCGATGA CTGGCGCAGC
CGCCCGCAAC ATGAACGCCG CTCGCAACTG GAAGCCTTGA TCGAAACCTG CCAGAGCGAG
GTGCTGATGC CCTCCCCGGT GCTCAGCGGC AAGGATTGGC TCGACCTGGC CACCCAGCGC
GAAGCCTCCC GCAGCCTGGG CGTCGAGGGC ATGATGCTCA AGGCTCGCGA CTCGCTGTAT
GGCGTCGGTC GCACCAAGGA CATGGGAGTG TGGTGGAAAT GGAAAATCGA CCCGTTCAGT
GTCGATGCCG TGCTGATTTA CGCGCAACGC GGTCACGGAC GACGCGCCAG CCTGTACAGC
GACTACACCT TTGCGGTGTG GGATGGCCCG CCCGAAGCCA GTGAACGCAC GCTGGTGCCG
TTCGCCAAGG CCTACTCGGG GCTGACCGAT GAAGAAATGC GCAAGGTCGA CGCCATCGTT
CGCAAGACGA CGGTGGAGAA ATTCGGGCCG GTCAGCAGCG TAACGCCGAC GCTGGTGTTC
GAGCTGGGCT TTGAAGGCAT CGCCCTGTCG AAGCGCCACA AGAGCGGCAT CGCGGTGCGT
TTCCCGCGCA TGCTGCGCTG GCGCCAGGAC AAGCCCGTCG CCGAAGCCGA CAGTCTGGCG
ACGCTGCAGG ACCTGCTGAA CTAG
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| Protein sequence | MKAFAELYAQ LDATTSSNAK LAAMRDYFEK AAAEDAAWAV YFLSGGRPRQ LVPTRVLREQ
AMTLASLPEW LFEESYQAVG DLAETLSLLL PQADHSNDEG LATWMEDKLL PLRGLPPEEL
AERLPMFWSQ LDRSSLMVCI KLITGSFRVG VSKLLVTRAL AALADIDSKR VAQRLVGYTD
LSHRPSAERY LKLIAPESED EHAQRGGQPY PFFLAHSLQQ PADQFEALLG PAQNWQVEWK
WDGIRAQLVK RDGRLWIWSR GEELVTDRFP ELHSLVQCLP DGTVIDGEIV VWKAPDANPD
ADAEFALNSD APAAAPSVQP FALLQQRIGR KTLGKKILAD VPVVVLAYDL LEWQGDDWRS
RPQHERRSQL EALIETCQSE VLMPSPVLSG KDWLDLATQR EASRSLGVEG MMLKARDSLY
GVGRTKDMGV WWKWKIDPFS VDAVLIYAQR GHGRRASLYS DYTFAVWDGP PEASERTLVP
FAKAYSGLTD EEMRKVDAIV RKTTVEKFGP VSSVTPTLVF ELGFEGIALS KRHKSGIAVR
FPRMLRWRQD KPVAEADSLA TLQDLLN
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