| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3858 |
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| Symbol | |
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| ID | 3369393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4598394 |
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| End bp | 4599353 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654215 |
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| Product | nucleoside-specific channel-forming protein, Tsx |
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| Protein accession | YP_236926 |
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| Protein GI | 66047085 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.297258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGC CGCCATTCAC CCGACCCGCA ATGCCCTCAA GATTTCTCAT GCCTCTGCTG
TTCGCCGCCG CCGCGGCGCT GCCCTGTACC AGCGTCCTGG CAGCGCCCGC CACCGCCGAA
GACTCGGCGC AGGGCGAAGC ACTCAGCCCG CCCGCCTCGC CCAAGGAAGG TAAAGGCGCG
TATTTTTCAG ACTGGTTCAA CCAGGACCTG ACGCTGATCG GCAGCAAGGA CATCAGCTTC
GGCCCCAAGC CCAACGATGA CATCTACCTG GAGTACGAAT ACTTCGGCCG CAAAGGGCCG
TTCGAGCTGT ATGGCTATGT CGACGTACCG AAGATCCTCG GCATCGGCAA CGATAATGAC
AAAGGCGTCT GGGACCACGG CTCGCCGCTG TTCATGGAGC ACGAGCCACG CATCTCGATC
GACTACCTCG CCGGGCGCAG TCTGGCCGTC GGGCCGTTCA AGGAATGGTA CGTCGCCTTC
GACTGGATCT ATGACCACGG CAGCAATACG GCCAACCGGG CCAACACCCT GTACAGCGGC
CTGGGCACTG ACATCGATAC CCACTCGCGG GTCAATCTGT CAGCCAACTT CTATGGCCGC
TACCAGTGGG AGAACTACGG CGCCAGCAAC GAGTACTCGT GGGACGGCTA CCGCGCGCAG
CTCAAATACA TCGTACCGAT CAGCACCTTC GATAACGGTG CGTCGCTGAC CTACATCGGC
TTCACCAACT TCGATTTCGG CTCGGACCTC AAGAACGATC CGGCACGCAC CGGCAACTCC
ACGGTCGCCA CCAATGTGCT GCTTTATGCC TTCACGCACC TGCGCTTCAC CCTGGTTGGC
CGCTACTTCC ACAACGGCGG CAACTGGCAG GACGGCAGCG AGCTGAACTT CGGCGATGGC
AACTTCCGCG CGCGCTCCGA TGGCTGGGGC TATTACGCAG GCGTGGGTTA CCAGTTCTGA
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| Protein sequence | MPQPPFTRPA MPSRFLMPLL FAAAAALPCT SVLAAPATAE DSAQGEALSP PASPKEGKGA
YFSDWFNQDL TLIGSKDISF GPKPNDDIYL EYEYFGRKGP FELYGYVDVP KILGIGNDND
KGVWDHGSPL FMEHEPRISI DYLAGRSLAV GPFKEWYVAF DWIYDHGSNT ANRANTLYSG
LGTDIDTHSR VNLSANFYGR YQWENYGASN EYSWDGYRAQ LKYIVPISTF DNGASLTYIG
FTNFDFGSDL KNDPARTGNS TVATNVLLYA FTHLRFTLVG RYFHNGGNWQ DGSELNFGDG
NFRARSDGWG YYAGVGYQF
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