Gene Psyr_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3826 
Symbol 
ID3369361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4554341 
End bp4554904 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content57% 
IMG OID637654183 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_236894 
Protein GI66047053 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.648801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00409126 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAAA AAATCGCTCT CGCCGCCTGC TCCGTGCTGT TCGCCGCCAA CCTGATGGCT 
GCCCCGGATA AAGCCACGCA CGTGGTGCTC GACACCAGTT TCGGCCAGAT TGAAATCGAA
CTCGCAGACA CCAAGGCGCC GGTCAGCACC CAGAACTTTC TGGGTTATGT CGACAGCGGC
TTCTACACCA ACACCATCTT TCACCGGGTG ATTCCGGGCT TCATGGTGCA AGGCGGTGGC
TTCACCCCGC AGATGGTTCA GAAGCAGACC AAGGATCCGA TCAAGAACGA AGCCCAGAAC
GGTTTGCATA ACGTCCGCGG CACCATTGCC ATGGCGCGTA CCTCGGACGT GAACTCGGCC
ACCAGTCAAT TCTTCATCAA CACCAACGAC AATGCCATGC TCGACAACGG CGCACGCGAC
TTCGGTTACG CAGTGTTCGG CAAAGTCGTC AAGGGCATGG ACGTCGTCGA CAACATCGTC
AACGCCCGCA CCACTACTCA GAAAGGCATG CAAAACGTGC CAGTCGACCC GATCCTGATC
AAGTCCGCCA AACGCGTCAA CTGA
 
Protein sequence
MLKKIALAAC SVLFAANLMA APDKATHVVL DTSFGQIEIE LADTKAPVST QNFLGYVDSG 
FYTNTIFHRV IPGFMVQGGG FTPQMVQKQT KDPIKNEAQN GLHNVRGTIA MARTSDVNSA
TSQFFINTND NAMLDNGARD FGYAVFGKVV KGMDVVDNIV NARTTTQKGM QNVPVDPILI
KSAKRVN