Gene Psyr_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3816 
Symbol 
ID3369351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4538842 
End bp4541103 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content51% 
IMG OID637654173 
Producthypothetical protein 
Protein accessionYP_236884 
Protein GI66047043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00625268 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCAGG CAACCGCCCA ACAATTTGTT GATGAAATAG TTAGCTCACT GCCTGAGTGG 
GGGAAGAGCC ACCGGACATT GGTGGGGCTA TCGGGTCAGA CAACCTTGAT CGCAGAGGCT
GCGCCTAGCC CTTTTTTGAC GGCCCTCGAA TCTATGTTCG AGGGCGAGCA GGACAAGATC
GTTGGTCTGT TTCATGACAA AGATGATTGG TCATTTGGTA CATCAGGTCC CTACATCCAG
ATCCTCTGGG CGCTTGAGGT TTTAGCTTGG GACCCGAAGC TTTTGAATCG AGCTGCGATA
GTTTTAGCAA AGCTTGCCGA GCTGGATCCC ACGCCGGACT CAAATAGAGT CAACCGTCCG
ATCAATAGCT TGAGGGACAT TCTGCTTACC TGGTCGCCCA ACACTCATGC GACTCTTCGC
CAGCGTATTG CATGCATCGA TAGCGTGCTT TCCAACGTTC CAGCGGTAGG ATGGCAGCTT
TTGGTCAAGC TGCTCCCTCG GTCGCACGAC TCTGTCTCGC CGACCCAAAA ACCCAAGCTT
CGCGATGTTG CATCTGTAAA TCCAGAGGAG CTTACGTTTG GAGTAGTTTG GGATGCACAA
CATGCCGTGG TAAGTCGTGC AATCAAATTG GCTGCTGATA ATGAAGAAAG GACAATAGTG
CTGGTTAACT CTTTTTCTGC CTTCAGGCCG GAGGACCGAG AGGCTGTGCT TGCGTTTATT
GATTCGTATC TGGCCACGCA TCGGTCGGAC CCAGCTAGCC TGGTCTGGAG TGCACTTCAG
GCGATGGCAG CCAAGCACGA GTTTTATGCA GACAGTGACT GGGCTATTGA GGAGGAAGAG
CGGCTGGGGA TTCAATCTCT TTTGGATAAG CATCGCCCTG TCGATCCGAT TTACCAGGAC
AAGCAGCTGT TTGATGACTG GTTCCCACAT GTCGGGCGTT ATCAGGATAT TAGGGATTTG
GAGCCTGATG TTTTAAGAAA AGAGGCTTTG GCCCGTATCC TGGAGCGCGC CGGTCCACTC
GGTATACTTG AACTCACACA AAAGGTCGCT ATTCCGACGC TTGTGGCTCA GGCAATCGAT
ATCGAACAGA TCACTCAAAC AGATCTTGTC ACGCTAGTTG AGGCCACGGT AATTCAGTCT
CCAGTTCCCG AGCTGGCCCT CTACGCGTCA GCACTTGGCG CGCAAAGATA CGGAGATTCC
TGGTCTCAGA TTATCGAGGC TAAGATATTT CCACTGGTGC CTGACACAGG AGATAAATGT
TATTTGCTGC TCGGTTGGCC GGTTAACAGC TGGACTTGGG ATTTTGTTGA GTCTCAAGGG
CAGGAAGTTC ACGAGCAATA CTGGCGGCGT CTTAACATCG TTCCGAATGA TGGGGCGTCG
GACGATTTGA TGAGAGTCGT GAAAGAGTTT CGTGCCGTCG AGCGGAGTCT TGACGTCCTA
TGCCTAGGGC ACCGCCGGCT AGCTGAGTTT GATTCTGAAA TGATTGTTGC TCTGCTTTCT
GAAGGGTTAC GGCAGTCTGA TAGTAAACAA AGTGGAACGA TGCTTTCTTA TTATCTCGAA
TCAGCGTTCG AAGAGCTTGA TGGGCGTGAT GATGTTGAGC CCTTTACTAT CGCACGGTTG
GAGTATGCGT ATCTACCTTT AATTCAGGAT CAGCGACGAC CCTTAGTTAT CTATAAGCAG
ATGGCCGAAG ACTCGGATAT TTTTATAGAG ATTCTGTCCC ATGTTTTTAG AGGTAAGAAC
TCTCCTGCAA GGAGGGAGTT GACAGATCGC GAAAGGAATA TGGCGAGTGC CTCATTCAGG
TTGCTTTCAG CTTTCGAAAC ATTGCCTGGA GCTACCGCAG AGGGTGTTGA TCAAGCGAAG
CTTGAGTCTT GGATTGCAAG TGTACTTACG GCTGCGGTTG AGAGAGACAT TGCCGATATT
GCGGATCAGC ATATAGGGAA GATTTTCGCG CACTCCCCGC GATTCGATGT ATCGGCAATT
TGGCCTCCGA CTGAGGTTTG CATGGTCATA GAAAACCTTG CTTCAGAGCA AATTGAAACC
GGTTTTGAGA TGGAGTGCTT TAACAAGCGT GGCGCTTACA TGAAGTCGTT TGGGGAGGGT
GGGGCCCAGG AACGAGTACT AGCAAGGCAG TACTCAAGTT GGGCGGCACT GGCCGTGGAG
TTCACCCGGA CATCTGCGAT GCTTGAGAGG GTGTCAGAGT CGTGGAGTCG AATGGCGGAT
AGGGAAGATC TTAGTGCGGA AGTCGACAAG CTGAAACGCT GA
 
Protein sequence
MNQATAQQFV DEIVSSLPEW GKSHRTLVGL SGQTTLIAEA APSPFLTALE SMFEGEQDKI 
VGLFHDKDDW SFGTSGPYIQ ILWALEVLAW DPKLLNRAAI VLAKLAELDP TPDSNRVNRP
INSLRDILLT WSPNTHATLR QRIACIDSVL SNVPAVGWQL LVKLLPRSHD SVSPTQKPKL
RDVASVNPEE LTFGVVWDAQ HAVVSRAIKL AADNEERTIV LVNSFSAFRP EDREAVLAFI
DSYLATHRSD PASLVWSALQ AMAAKHEFYA DSDWAIEEEE RLGIQSLLDK HRPVDPIYQD
KQLFDDWFPH VGRYQDIRDL EPDVLRKEAL ARILERAGPL GILELTQKVA IPTLVAQAID
IEQITQTDLV TLVEATVIQS PVPELALYAS ALGAQRYGDS WSQIIEAKIF PLVPDTGDKC
YLLLGWPVNS WTWDFVESQG QEVHEQYWRR LNIVPNDGAS DDLMRVVKEF RAVERSLDVL
CLGHRRLAEF DSEMIVALLS EGLRQSDSKQ SGTMLSYYLE SAFEELDGRD DVEPFTIARL
EYAYLPLIQD QRRPLVIYKQ MAEDSDIFIE ILSHVFRGKN SPARRELTDR ERNMASASFR
LLSAFETLPG ATAEGVDQAK LESWIASVLT AAVERDIADI ADQHIGKIFA HSPRFDVSAI
WPPTEVCMVI ENLASEQIET GFEMECFNKR GAYMKSFGEG GAQERVLARQ YSSWAALAVE
FTRTSAMLER VSESWSRMAD REDLSAEVDK LKR