Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3816 |
Symbol | |
ID | 3369351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4538842 |
End bp | 4541103 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637654173 |
Product | hypothetical protein |
Protein accession | YP_236884 |
Protein GI | 66047043 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00625268 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCAGG CAACCGCCCA ACAATTTGTT GATGAAATAG TTAGCTCACT GCCTGAGTGG GGGAAGAGCC ACCGGACATT GGTGGGGCTA TCGGGTCAGA CAACCTTGAT CGCAGAGGCT GCGCCTAGCC CTTTTTTGAC GGCCCTCGAA TCTATGTTCG AGGGCGAGCA GGACAAGATC GTTGGTCTGT TTCATGACAA AGATGATTGG TCATTTGGTA CATCAGGTCC CTACATCCAG ATCCTCTGGG CGCTTGAGGT TTTAGCTTGG GACCCGAAGC TTTTGAATCG AGCTGCGATA GTTTTAGCAA AGCTTGCCGA GCTGGATCCC ACGCCGGACT CAAATAGAGT CAACCGTCCG ATCAATAGCT TGAGGGACAT TCTGCTTACC TGGTCGCCCA ACACTCATGC GACTCTTCGC CAGCGTATTG CATGCATCGA TAGCGTGCTT TCCAACGTTC CAGCGGTAGG ATGGCAGCTT TTGGTCAAGC TGCTCCCTCG GTCGCACGAC TCTGTCTCGC CGACCCAAAA ACCCAAGCTT CGCGATGTTG CATCTGTAAA TCCAGAGGAG CTTACGTTTG GAGTAGTTTG GGATGCACAA CATGCCGTGG TAAGTCGTGC AATCAAATTG GCTGCTGATA ATGAAGAAAG GACAATAGTG CTGGTTAACT CTTTTTCTGC CTTCAGGCCG GAGGACCGAG AGGCTGTGCT TGCGTTTATT GATTCGTATC TGGCCACGCA TCGGTCGGAC CCAGCTAGCC TGGTCTGGAG TGCACTTCAG GCGATGGCAG CCAAGCACGA GTTTTATGCA GACAGTGACT GGGCTATTGA GGAGGAAGAG CGGCTGGGGA TTCAATCTCT TTTGGATAAG CATCGCCCTG TCGATCCGAT TTACCAGGAC AAGCAGCTGT TTGATGACTG GTTCCCACAT GTCGGGCGTT ATCAGGATAT TAGGGATTTG GAGCCTGATG TTTTAAGAAA AGAGGCTTTG GCCCGTATCC TGGAGCGCGC CGGTCCACTC GGTATACTTG AACTCACACA AAAGGTCGCT ATTCCGACGC TTGTGGCTCA GGCAATCGAT ATCGAACAGA TCACTCAAAC AGATCTTGTC ACGCTAGTTG AGGCCACGGT AATTCAGTCT CCAGTTCCCG AGCTGGCCCT CTACGCGTCA GCACTTGGCG CGCAAAGATA CGGAGATTCC TGGTCTCAGA TTATCGAGGC TAAGATATTT CCACTGGTGC CTGACACAGG AGATAAATGT TATTTGCTGC TCGGTTGGCC GGTTAACAGC TGGACTTGGG ATTTTGTTGA GTCTCAAGGG CAGGAAGTTC ACGAGCAATA CTGGCGGCGT CTTAACATCG TTCCGAATGA TGGGGCGTCG GACGATTTGA TGAGAGTCGT GAAAGAGTTT CGTGCCGTCG AGCGGAGTCT TGACGTCCTA TGCCTAGGGC ACCGCCGGCT AGCTGAGTTT GATTCTGAAA TGATTGTTGC TCTGCTTTCT GAAGGGTTAC GGCAGTCTGA TAGTAAACAA AGTGGAACGA TGCTTTCTTA TTATCTCGAA TCAGCGTTCG AAGAGCTTGA TGGGCGTGAT GATGTTGAGC CCTTTACTAT CGCACGGTTG GAGTATGCGT ATCTACCTTT AATTCAGGAT CAGCGACGAC CCTTAGTTAT CTATAAGCAG ATGGCCGAAG ACTCGGATAT TTTTATAGAG ATTCTGTCCC ATGTTTTTAG AGGTAAGAAC TCTCCTGCAA GGAGGGAGTT GACAGATCGC GAAAGGAATA TGGCGAGTGC CTCATTCAGG TTGCTTTCAG CTTTCGAAAC ATTGCCTGGA GCTACCGCAG AGGGTGTTGA TCAAGCGAAG CTTGAGTCTT GGATTGCAAG TGTACTTACG GCTGCGGTTG AGAGAGACAT TGCCGATATT GCGGATCAGC ATATAGGGAA GATTTTCGCG CACTCCCCGC GATTCGATGT ATCGGCAATT TGGCCTCCGA CTGAGGTTTG CATGGTCATA GAAAACCTTG CTTCAGAGCA AATTGAAACC GGTTTTGAGA TGGAGTGCTT TAACAAGCGT GGCGCTTACA TGAAGTCGTT TGGGGAGGGT GGGGCCCAGG AACGAGTACT AGCAAGGCAG TACTCAAGTT GGGCGGCACT GGCCGTGGAG TTCACCCGGA CATCTGCGAT GCTTGAGAGG GTGTCAGAGT CGTGGAGTCG AATGGCGGAT AGGGAAGATC TTAGTGCGGA AGTCGACAAG CTGAAACGCT GA
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Protein sequence | MNQATAQQFV DEIVSSLPEW GKSHRTLVGL SGQTTLIAEA APSPFLTALE SMFEGEQDKI VGLFHDKDDW SFGTSGPYIQ ILWALEVLAW DPKLLNRAAI VLAKLAELDP TPDSNRVNRP INSLRDILLT WSPNTHATLR QRIACIDSVL SNVPAVGWQL LVKLLPRSHD SVSPTQKPKL RDVASVNPEE LTFGVVWDAQ HAVVSRAIKL AADNEERTIV LVNSFSAFRP EDREAVLAFI DSYLATHRSD PASLVWSALQ AMAAKHEFYA DSDWAIEEEE RLGIQSLLDK HRPVDPIYQD KQLFDDWFPH VGRYQDIRDL EPDVLRKEAL ARILERAGPL GILELTQKVA IPTLVAQAID IEQITQTDLV TLVEATVIQS PVPELALYAS ALGAQRYGDS WSQIIEAKIF PLVPDTGDKC YLLLGWPVNS WTWDFVESQG QEVHEQYWRR LNIVPNDGAS DDLMRVVKEF RAVERSLDVL CLGHRRLAEF DSEMIVALLS EGLRQSDSKQ SGTMLSYYLE SAFEELDGRD DVEPFTIARL EYAYLPLIQD QRRPLVIYKQ MAEDSDIFIE ILSHVFRGKN SPARRELTDR ERNMASASFR LLSAFETLPG ATAEGVDQAK LESWIASVLT AAVERDIADI ADQHIGKIFA HSPRFDVSAI WPPTEVCMVI ENLASEQIET GFEMECFNKR GAYMKSFGEG GAQERVLARQ YSSWAALAVE FTRTSAMLER VSESWSRMAD REDLSAEVDK LKR
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