| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3803 |
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| Symbol | |
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| ID | 3369338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4520428 |
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| End bp | 4521720 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654161 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_236872 |
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| Protein GI | 66047031 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000398748 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATTC ACTCGCTTTG GCTCAAGACC CAGGAACTCT GGGACATGCT CGATCAGCAC
CCGTGGGTAC GCACCGGGCT GGCGCTGATC CTGTTGCTGA CCGCCGCACT GGTGCTTGGC
CGCGTGGCGC GCTTTCTGGT GCTGTACGCC GTCAGGATGC TCGGCCGTCA GCCGTCCCTG
CATTGGGTCA ACGACTTCCG CCACAACAAG GTTTTCCATC GCCTGGCGCA GATGGTGCCG
TCGCTGGTCA TCCAGTTCGG CCTCACCCTG GTCCCGGGCC TGAGTACTGC GGGCCGGAAC
GTGATCGGCA ACATCGCCAT GGCGTTCACC ATCCTGTTCA TGACCCTGGC CATCGGCACC
CTGCTCAACG CCCTGCTGGA CATCTACGCG CGCACCGAAC ACGCCCGCAC GCGCTCCATC
AAGGGTTACG TGCAGCTGTC GAAGATGATT CTTTACGTCT TCGCCGGGAT CATCATCGTC
GCCACCCTGA TCGACCGTTC GCCCCTGCTA CTGCTGTCCG GCCTCGGCGC CATGTCGGCG
GTCATCCTGT TGGTCTACAA GGACACCCTG CTCTCCTTCG TCGCCAGCGT GCAGCTGACC
AGCAACGACA TGCTGCGCGT CGGCGACTGG ATCGAAATGC CGCAAGTGGG CGCGGATGGC
GATGTGGTGG ACATCACCCT GCACACCGTC AAGGTGCAGA ACTTCGACAA AACCATCGTC
TCCATCCCGA CCTGGCGCCT GATGTCCGAG TCGTTCCGCA ACTGGCGCGG CATGCAGCAA
TCCGGCGGAC GGCGCATCAA GCGCAGCCTG TTCATCGACG CCAGCGGCGT GCGCTTCGTG
CGCGACGACG AAGAGCAGCA ACTCATGCAA ATCCACCTGC TCACCGACTA CATCGGCCGC
AAACAGGCCG AACTGCTGGC CTGGAACCAG GCACAAGGCA ACGTCGCACA AATGTCCGCC
AACCGCCGGC GCATGACCAA CATCGGCACC TTCCGAGCCT ACGCCCTGGC ATACCTGAAG
AGCCACGTCG ACATCAACCC GAACATGACC TGCATGGTTC GCCAGCTCGA ACCCACCTCA
CAGGGCATCC CGCTGGAAAT CTACTGCTTC ACCCGCACGA CGGTGTGGGT GGATTACGAG
CGGATACAGG GGGATATTTT CGATTATCTG ATTACGGTGA TGCCGGAGTT CGGGTTGAGT
TTGTATCAGC AGCCTAGTGG GGCGGATATG CGGGTGGGGT TGAGGGGGGA GACTATGAGT
CAAGTCACAG CTGACTGGAC GAAGGAAAGG TGA
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| Protein sequence | MDIHSLWLKT QELWDMLDQH PWVRTGLALI LLLTAALVLG RVARFLVLYA VRMLGRQPSL
HWVNDFRHNK VFHRLAQMVP SLVIQFGLTL VPGLSTAGRN VIGNIAMAFT ILFMTLAIGT
LLNALLDIYA RTEHARTRSI KGYVQLSKMI LYVFAGIIIV ATLIDRSPLL LLSGLGAMSA
VILLVYKDTL LSFVASVQLT SNDMLRVGDW IEMPQVGADG DVVDITLHTV KVQNFDKTIV
SIPTWRLMSE SFRNWRGMQQ SGGRRIKRSL FIDASGVRFV RDDEEQQLMQ IHLLTDYIGR
KQAELLAWNQ AQGNVAQMSA NRRRMTNIGT FRAYALAYLK SHVDINPNMT CMVRQLEPTS
QGIPLEIYCF TRTTVWVDYE RIQGDIFDYL ITVMPEFGLS LYQQPSGADM RVGLRGETMS
QVTADWTKER
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