| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3763 |
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| Symbol | |
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| ID | 3369298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4481276 |
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| End bp | 4482352 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637654121 |
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| Product | GGDEF |
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| Protein accession | YP_236832 |
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| Protein GI | 66046991 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.199974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCT ATCACCGCCG AGGGATGGCA TTCGCCAAGC GGATCTACGC CCCGAGATGC
TTCGGTGTCA GCGTTGGCTT TGTGACGGTC GCTGTTTCTT TGTATTACGT GAACACAGCA
CACTGGGCGT GGTTGTTGGC ACTGCTCTAC AGTCTGGTAT GGCCACATGT TGCTTATCAG
CTCGCAAGAA CGTCACGCGA GCCCTACCAG GCTGAATGGC GCAATCTGCT GTTCGATTCG
ATGATGGGCG GTTTCTGGAT TGGCGCGATG GGTTTCAGCG CCGTTCCCGG GGTCACGGTC
CTCGCCATGA TGGCCATGCA TAACATGGCC GCCGCCGGGC CACGGCTGAT GCTGCAAGGC
CTGTGCATGC AGGCACTGGG CGTGCTGATT TCGCTGGCCG CGCTCGACCC TGTCGTCAAT
CTGCATGGCA ACATGGCGCA GATCTACGCC TGCCTTCCGG TACTGGTGAC CTACCCTATC
TTCATTGGCT GGCTGAGCCA TCAGGTCACA CTCAAGCTAT GGGAACACCG CAACATCCTG
CGCAAGGTCA GCCGCACCGA CAGCCTCACC GGCCTGCTCA ATCATGGTGC GTGGAAGGAC
CTGCTTGATC TGGAGTACGC CAGTAGCCAG AACGCGTATC AGGAGTGCGT CATCGCGCTG
ATCGATATCG ATCACTTCAA GGTCATCAAC GACACTTATG GCCACCTGAT GGGCGACACG
GTGCTGCAGA GTATCAGCGA AGCACTGATC GAAAACCTGC GTGATTCCGA CCTGATCGGG
CGTTGTGGCG GCGATGAGTT CTGCGTCATT CTGCCCGACA CCAGCTTGCT TCAGGCAAAG
GAAATCCTCG AGCGCCTGCG TCTGGCGATA GATGAAATGA CCTATACCCT GCATTGCGAT
CTCAAGGTCA GTCTCAGTAT CGGTATTGCC GCCTATTCTC CTGAAATGCC GGATGCCTCG
TCGTGGCTGC ATGAAGCAGA CAAGGCGCTG TATCTGGCCA AAAGCACAGG CCGCAACCGC
GTCGCCAGCC CTCAGGATGC GCCGCCAGAA CTCCAGTCGC TTGGCGCACA GGCCTGA
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| Protein sequence | MSTYHRRGMA FAKRIYAPRC FGVSVGFVTV AVSLYYVNTA HWAWLLALLY SLVWPHVAYQ
LARTSREPYQ AEWRNLLFDS MMGGFWIGAM GFSAVPGVTV LAMMAMHNMA AAGPRLMLQG
LCMQALGVLI SLAALDPVVN LHGNMAQIYA CLPVLVTYPI FIGWLSHQVT LKLWEHRNIL
RKVSRTDSLT GLLNHGAWKD LLDLEYASSQ NAYQECVIAL IDIDHFKVIN DTYGHLMGDT
VLQSISEALI ENLRDSDLIG RCGGDEFCVI LPDTSLLQAK EILERLRLAI DEMTYTLHCD
LKVSLSIGIA AYSPEMPDAS SWLHEADKAL YLAKSTGRNR VASPQDAPPE LQSLGAQA
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