Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3661 |
Symbol | |
ID | 3369196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4347509 |
End bp | 4348903 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654020 |
Product | fumarate hydratase |
Protein accession | YP_236731 |
Protein GI | 66046890 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.42486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCGCA CCGAAACCGA TAGCATTGGC CCGATCGAAG TCCCCGAAGA TGCCTACTGG GGCGCGCAGA CCCAACGCTC ACTGATCAAT TTTGCGATTG GCGACCAGCG AATGCCGCTG CCCGTCCTGC ACGCACTGAC CCTGATCAAG AAAGCTGCCG CACGGGTCAA CGATCGAAAT GGCGACTTGC CTGCCGACAT CGCCCGCCTG ATCGAACAGG CCGCCGACGA AGTGCTCGAC GGTCAGCATG ACGCGCAATT TCCGCTGGTG GTCTGGCAGA CCGGCAGTGG CACGCAGAGC AACATGAACG TCAACGAGGT GATCGCAGGC CGCGCCAACG AACTGGCTGG CCAGGGGCGT GGCGGCAAGT CACCGGTTCA CCCCAACGAT CATGTCAACC GCTCGCAAAG CTCCAACGAC TGCTTCCCGA CGGCCATGCA CATTGCCACT GCCCAGGCGG TCAAGGCGCA GCTGCTGCCG GCCATCGCCG AACTGTCCAG CGGGCTGGCT GAACAGGCCG CGCGGCACAT GAAGCTGGTC AAGACCGGGC GCACACACAT GATGGACGCG ACGCCGATCA CCTTCGGCCA GGAGCTGTCC GGGTTTGTCG CGCAACTCGA TTATGCGGAA AAAGCCATTC GCGCCGCCCT GCCCGCCGTC TACGAGCTGG CTCAGGGCGG AACAGCAGTC GGCACCGGGC TCAATGCGCC CAAGGGCTTT GCCGAAGCCA TTGCCGCAGA ACTGGCCGCT CTCTCAGGCC TGCCATTCGT TACCGCACCC AACAAGTTCG CCGCGCTGGC CGGTCACGAG CCACTTGCAG CGCTGTCCGG CGCACTGAAG ACGCTGGCCG GCACACTGAT GAAGATTGCC AACGACCTGC GTCTGCTGGG CTCAGGCCCG CGTGCCGGTC TGGCAGAAGT CAGACTGCCT GCCAACGAGC CCGGCAGTTC GATCATGCCC GGCAAGGTCA ACCCGACCCA GTGCGAGGCC TTGTCGATGC TCGCCTGCCA GGTCATGGGC AACGACGTGA CCATCGGTTT CGCCGCCAGT CAGGGCCACC TGCAACTGAA CGTGTACAAG CCGGTGATCA TCCATAACGT TCTGCAGTCG ATTCGCCTGC TGGCCGACGG CTGCAGCAAT TTCAACGAGC ACTGCATCGC GGGCATGGAG CCGGATGGCG AAAAAATGGC CGAACACCTG GAGCGCGGCC TGATGCTGGT CACCGCACTC AATCCGCATA TCGGCTATGA CAAGTCGGCG CAGATTGCCA AGAAAGCCTA CACCGAAGGT CTGACCCTGC GCGAAGCGGC ATTGGCGCTG GGTTACCTGA CCGATGAAGA GTTCGATGCC TGGGTGCGGC CGGACAAAAT GCTCGAGGCA GGCAGTAATG GCTGA
|
Protein sequence | MSRTETDSIG PIEVPEDAYW GAQTQRSLIN FAIGDQRMPL PVLHALTLIK KAAARVNDRN GDLPADIARL IEQAADEVLD GQHDAQFPLV VWQTGSGTQS NMNVNEVIAG RANELAGQGR GGKSPVHPND HVNRSQSSND CFPTAMHIAT AQAVKAQLLP AIAELSSGLA EQAARHMKLV KTGRTHMMDA TPITFGQELS GFVAQLDYAE KAIRAALPAV YELAQGGTAV GTGLNAPKGF AEAIAAELAA LSGLPFVTAP NKFAALAGHE PLAALSGALK TLAGTLMKIA NDLRLLGSGP RAGLAEVRLP ANEPGSSIMP GKVNPTQCEA LSMLACQVMG NDVTIGFAAS QGHLQLNVYK PVIIHNVLQS IRLLADGCSN FNEHCIAGME PDGEKMAEHL ERGLMLVTAL NPHIGYDKSA QIAKKAYTEG LTLREAALAL GYLTDEEFDA WVRPDKMLEA GSNG
|
| |