Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3581 |
Symbol | |
ID | 3369112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4264625 |
End bp | 4265854 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637653936 |
Product | pseudouridine synthase, Rsu |
Protein accession | YP_236651 |
Protein GI | 66046810 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAA AAGACAAGCA GGACAGCCAG GAAATCGGAC CCGCAGGCGA AAAGCTGCAG AAGGTTCTGG CGCGCATTGG CGTGGGTTCA CGCCGCGACG TGGAAGCCTG GATTACCCAA GGCCGTATCA AGGTCAACGG CAAGGACGCG ACCCTCGGTC AACGCGTCGA CCTGCATGAC GCCATCAGTG TCGATGGTCG CGTCATCAAG CGCGAAGAAG CGGCCGAAAC GGTCCGTCGC GTCATCATGT ACAACAAGCC CGATGGTGAA ATCTGCACCC GTGACGACCC TGAAGGCCGT CCGACCGTGT TTGATCGTCT GCCGCGCCCG AAAGAAGGCC GCTGGATCAA CATCGGTCGT CTCGACATCA ATACCACCGG CCTGCTGATG TTCACCACCG ACGGTGAACT CGCCAACCGC CTGATGCACC CGTCGTTTGA AATGGACCGT GAATACGCGG TTCGCGTGCG TGGCGAAGTC GATGACGACA TGCTGCTGCG CCTCAAGAAC GGTGTGATTC TCGAAGACGG TCCTGCGCGC TTCACCGATA TCCAGCAGGC ACCGGGCGGC GAAGGCTTCA ACCACTGGTA TCACTGCGTG GTGATGGAAG GCCGCAACCG CGAAGTACGT CGTCTCTGGG AATCCCAGGG GCTGGTGGTC AGCCGCCTGA AGCGCGTGCG TTACGGGCCG GTGTTCCTCA ACTCCGACCT GCCGATGGGC CGCTGGCGCG AAATGAGCCA GTACGAAGTC GATATTCTGG CCGCTGAAGT CGGTCTGCAA CCTGTGGCCC AGCCGCAGAT GAATGCCAAG ACCAAGGACA AGATGGAGCG TCTGCAGCGT CAATCGTCGC GCCCTCTGGG CAAAGGCGAG CGCGTTCGCA CCTTGCGTCC GGCTGCTGGT GCTCCGGCGA CCGGCGGCGA GCGCGCGCCG CGTCAGCCGC AGATCACCGG CAGCGAGCGT GATCGTCCGC GCGGTGGCGA TTCGACTCAG CGTCCTTCGC CGCGCAAGGA TTCGGGCAAG CCCGGTTCGC GCGCGCCGCG TCCGGCCGAC AACAGCCGTG GCACGCCGGT CGCCGAGCGT CCGAGCGACA TGAACAAGCG TCCGGCCAAG CCGGGCCCCA AGCGTGTCGG CATCAAGCTG GTCAACGATG ATGCGCCGTC AGGCAAGCGT CGTGGCCCAC CGGCAGGTTC AGGTCAGCGT CCGGGCTTCG GTCGTCGCAA GCCCGAGTGA
|
Protein sequence | MSEKDKQDSQ EIGPAGEKLQ KVLARIGVGS RRDVEAWITQ GRIKVNGKDA TLGQRVDLHD AISVDGRVIK REEAAETVRR VIMYNKPDGE ICTRDDPEGR PTVFDRLPRP KEGRWINIGR LDINTTGLLM FTTDGELANR LMHPSFEMDR EYAVRVRGEV DDDMLLRLKN GVILEDGPAR FTDIQQAPGG EGFNHWYHCV VMEGRNREVR RLWESQGLVV SRLKRVRYGP VFLNSDLPMG RWREMSQYEV DILAAEVGLQ PVAQPQMNAK TKDKMERLQR QSSRPLGKGE RVRTLRPAAG APATGGERAP RQPQITGSER DRPRGGDSTQ RPSPRKDSGK PGSRAPRPAD NSRGTPVAER PSDMNKRPAK PGPKRVGIKL VNDDAPSGKR RGPPAGSGQR PGFGRRKPE
|
| |