| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3568 |
|---|
| Symbol | |
|---|
| ID | 3369099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4249849 |
|---|
| End bp | 4250961 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637653923 |
|---|
| Product | succinylglutamate desuccinylase/aspartoacylase |
|---|
| Protein accession | YP_236638 |
|---|
| Protein GI | 66046797 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAA CCGATCATGT ATTGCCGTGG AGCACCCTCG GCACCGAGCG CACGCTGAGT
GTCTTTCGCT TCGGCACCGG CGAGCGCAAG GCTTACATCC AGGCCAGCCT GCATGCCGAC
GAACTGCCCG GCATGCGCAC GGCCTGGGAA CTGAAAAAAA GCCTGACCGA GCTGGAGCAG
CAAGGCCTCC TCAAAGGTGT CGTCGAACTG GTACCGGTGG CCAATCCGCT GGGCCTGGGG
CAGTTGCTGC AAGGCGCGCA TCAGGGCCGT TTCGAGTTCG GCAGTGGCAA GAACTTCAAC
CGTGACTTCA CCGAACTGAG CGAGCCGGTC GCCGAGTTGC TGGAAGGTCA GCTGGGCGAT
GACCCGCGCG CCAATACCCG GCTGATTCGC CAGGCGATGA GCGCTGCGCT CGAAGGGCTG
CCCGCGCCGC AGAGCGAATT GCAAGGCATG CAGCGCATCC TGCTCCGTCA TGCCTGCGTC
GCTGATGTGG TGCTCGATCT GCATTGTGAT GCCGATGCTG CGCTGCACAT GTACGCCTTG
CCGCAGCACT GGCCACAATG GCGTTCGCTG TCGGCACATC TGAATATCCA GGTGGCGCTG
CTCGCCGAAG ATTCCGGTGG CAGCTCCTTC GATGAGGCCT GCTCGCTGCC GTGGTTGCGC
CTTTCGCGGA TTTTTCCGCA GGCGCAGATC CCGCTGGCCT GCCTCGCCAC CACCCTTGAA
CTGGGCGGTC AGGCCGACAC CGGCAAGCCG CAGGCAATCG CGCACGCCGA AGGTATCCTG
GCGTTCCTCG CCGAGCAGGG CTTCATCAGT GGTGATTGGC CGCAGCCGGT GCACGAAGCC
TGCGAAGGCT TGCCGTTCGA AGGCACCGAA TTGCTCTATG CGCCGCACCC TGGTGTGGTG
ACGTTCCTGC GCGCTGCAGG CGACAGGGTC GAGGCAGGCG ATCCGCTGTT CGAAGTGATC
GACCCGCTGT CCGATCAGGT CAGTACCATT TGTGCGAATA CTGCCGGGGT GTTGTTCGCC
ATCGAGCGGC TTCGTTACGC TCAACCCGGT TTCTGGCTGG CCAAGGTGGC GGGGCGCACG
GCGCTGCGTC ACGGACGTCT GCTCAGTGAT TGA
|
|---|
| Protein sequence | MQRTDHVLPW STLGTERTLS VFRFGTGERK AYIQASLHAD ELPGMRTAWE LKKSLTELEQ
QGLLKGVVEL VPVANPLGLG QLLQGAHQGR FEFGSGKNFN RDFTELSEPV AELLEGQLGD
DPRANTRLIR QAMSAALEGL PAPQSELQGM QRILLRHACV ADVVLDLHCD ADAALHMYAL
PQHWPQWRSL SAHLNIQVAL LAEDSGGSSF DEACSLPWLR LSRIFPQAQI PLACLATTLE
LGGQADTGKP QAIAHAEGIL AFLAEQGFIS GDWPQPVHEA CEGLPFEGTE LLYAPHPGVV
TFLRAAGDRV EAGDPLFEVI DPLSDQVSTI CANTAGVLFA IERLRYAQPG FWLAKVAGRT
ALRHGRLLSD
|
|---|
| |