| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3554 |
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| Symbol | |
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| ID | 3369085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4233420 |
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| End bp | 4233608 |
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| Gene Length | 189 bp |
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| Protein Length | 62 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637653909 |
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| Product | carbon storage regulator |
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| Protein accession | YP_236624 |
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| Protein GI | 66046783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
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| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00116705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.498706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGATTC TGACTCGTCG GTGCGCGGAA AGCCTGATCA TTGGGGATGG TGAAATCACC
GTCACCGTGC TCGGAGTGAA GGGTAATCAG GTGCGTATTG GTGTCAATGC GCCCAAGGAA
GTCGCTGTCC ACCGTGAAGA GATTTACCTG CGTATCAAGA AAGAGAAGGA CGAAGAACCA
AGCCATTAA
|
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| Protein sequence | MLILTRRCAE SLIIGDGEIT VTVLGVKGNQ VRIGVNAPKE VAVHREEIYL RIKKEKDEEP
SH
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