Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3504 |
Symbol | |
ID | 3369031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4177750 |
End bp | 4179987 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653855 |
Product | GAF:ATP-binding region, ATPase-like:histidine kinase A, N-terminal |
Protein accession | YP_236574 |
Protein GI | 66046733 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.280312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC TCGACAAAGA CGCCTTTGAA GTCCTTCTGG CCAATTGTGC GGATGAGCCC ATTCAGTTTC CCGGCGCCAT TCAACCCCAT GGCCTGCTGT TTACCCTTGC AGAGCCCGAG CTGACGATCC TGCAAGTCAG CGCCAACGTG CAGACTGTGC TGGGTCATGT GCCCGAGCAG TTGCTCGGCA AGGGGCTGGA CTGTGTGCTG GGCGCTGGCT GGGCCGAGGT GATCAGAAGC GCCAGTGCCC ATGATTCGTT CATCGACGCG CAACGCCTGC TGATGTCGAT CAACGGCATC GAGTTCGAAG CCTTGTTACA CCGTCATCAG GGCGTTCTGG TGCTGGAACT CGAAATTCAG GGCAAGGATG CGCAGTCGGT GAGTTATTCC GAGCGCACCG GCAACATGGG TCGCATGTTG CGTCAACTGC ACGCTGCGAG TGATCTGCAG ACCCTGTATG AAGTCAGTGT CCGCGAGATC CAGAAAATGA CCGGTTACGA CCGGGTGCTG ATCTACCGCT TCGAAGAGGA GGGCCATGGC CAGGTGATCG CCGAAGCGTC GGCGCCGTCC ATGGAGCTTT TCAACGGTCT GTTTTTCCCG GCATCGGACA TTCCCGAGCA GGCACGCGAA CTGTATCGCC GCAACTGGCT GCGCATTATT CCCGATGCCG ATTACATCCC GGTGCCCCTG GTGCCTCAAC TGCGCCCGGA CACTCAGCAG CAGCTTGATC TGAGTTTTTC GACGTTGCGC AGTGTTTCAC CGATCCACTG CCAGTACATG AAGAACATGG GCGTGCTGTC GTCCATGAGT GTGTCGCTGA TTCAGAGCGG CAAGTTGTGG GGATTGATCA GTTGCGGCAA CCGCACGCCG CTGTACGTGT CTCACGAGTT GCGCAGTGCC TGCCAGGCGA TAGGCCAGGT GCTGTCGCTG CAGATCAGCG CCATGGAAGC GCTGGAAATA AGCCGTCAGC GAGAGGCGAA GGTCAGGGCG CTCGAGCAAT TGAATCTGGC CATGGCCGGG TCCGAAGAAA ACGTCTTCGA TGGCCTGGCG CAGCAACCCC AGTTGTTGAT GGATCTGGTC GGCGCGACCG GCGTCGCCAT CATCGAAGAC CGGCAAACGC ATTGTTTCGG CATCTGCCCT GAGCCGTCCG ACATACGTGC ATTGCATGCC TGGATGATCG CTGGTGGCGA ACCAGTGTAT GCCAGTCATC ATCTATCCAG TGTCTATGCG CCTGCCGAGG CTTATCAGCC AGTCGCCAGC GGCGTATTGG CGATGAGCCT GCCAAAGCCG GTCGACAATG GCGTTATCTG GTTTCGTCCC GAGGTCAAGG AAACGGTCCA GTGGAGCGGT GATCCTAAAA AGCCATTGAA CATGGAAAGC TCGGCGGGCG GCATGCGTCT TCGGCCGCGT ACCTCGTTTG AGATCTGGAA GGTCGAGATG ACCGGGATCG CTACGAAGTG GAGCTACGGC GATGTGTTCG CCGCCAATGA CCTGCGCCGC TCCGCCCTGG AAAATGACCT CGCCCGTCAG GTGCGCAGGG AGCAACAGGC TGTTCGCGCG CGTGACGAGC TGGTAGCGGT CGTGTCCCAT GACTTGCGTA ACCCGATGAC GGTCATTTCC ATGCTCTGCG GGATGATGCA GAAGTCGTTC AGCTCCGATG GGCCGCATAC GTCGCGACGT ATTTCCACGG CAATCGATAC CATGCAGCAA GCGGCCAGCC GCATGAATGT GTTACTCGAA GACCTGCTCG ACACCTCGAA AATCGAAGCG GGCCGCTACA CGATTACGCC GCAGCCACTG GAAGTCAGCC AGATATTCGA GGAGGCCTAT ACCTTGCTGG CCCCGCTGGC GATGGACAAA TCCATCGAGA TCTCCTTCAA CGCCGAGCCT GACCTCAAGG TGCAGGCCGA CCCGGAGCGT CTTTTCCAGG TGCTGTCCAA CCTGATCGGC AACGCCATCA AGTTCACCCC GAAAATGGGT ACGATCGGTG TGGCGGCAAT GTCCAACGGC ACTGAAATCG TATTCACCGT ACGGGACTCC GGCGAGGGCA TCCCTCCCGA GCAGTTGCCA CACATCTTCG AGCGCTACTG GACCGTCAAG GAAGGCAACC CGACCGGCAC CGGCCTGGGC CTGTACATCT CCCAGGGCAT CATCAAGGCC CACGGCGGCG AACTGGCTGC GCAAAGCCAG GTGGGCGAGG GCAGCGAGTT CCGCTTCACG GTGCCAATGG CGGTTTGA
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Protein sequence | MSQLDKDAFE VLLANCADEP IQFPGAIQPH GLLFTLAEPE LTILQVSANV QTVLGHVPEQ LLGKGLDCVL GAGWAEVIRS ASAHDSFIDA QRLLMSINGI EFEALLHRHQ GVLVLELEIQ GKDAQSVSYS ERTGNMGRML RQLHAASDLQ TLYEVSVREI QKMTGYDRVL IYRFEEEGHG QVIAEASAPS MELFNGLFFP ASDIPEQARE LYRRNWLRII PDADYIPVPL VPQLRPDTQQ QLDLSFSTLR SVSPIHCQYM KNMGVLSSMS VSLIQSGKLW GLISCGNRTP LYVSHELRSA CQAIGQVLSL QISAMEALEI SRQREAKVRA LEQLNLAMAG SEENVFDGLA QQPQLLMDLV GATGVAIIED RQTHCFGICP EPSDIRALHA WMIAGGEPVY ASHHLSSVYA PAEAYQPVAS GVLAMSLPKP VDNGVIWFRP EVKETVQWSG DPKKPLNMES SAGGMRLRPR TSFEIWKVEM TGIATKWSYG DVFAANDLRR SALENDLARQ VRREQQAVRA RDELVAVVSH DLRNPMTVIS MLCGMMQKSF SSDGPHTSRR ISTAIDTMQQ AASRMNVLLE DLLDTSKIEA GRYTITPQPL EVSQIFEEAY TLLAPLAMDK SIEISFNAEP DLKVQADPER LFQVLSNLIG NAIKFTPKMG TIGVAAMSNG TEIVFTVRDS GEGIPPEQLP HIFERYWTVK EGNPTGTGLG LYISQGIIKA HGGELAAQSQ VGEGSEFRFT VPMAV
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