Gene Psyr_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3484 
Symbol 
ID3369011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4153884 
End bp4154762 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content61% 
IMG OID637653835 
ProductDNA-binding transcriptional regulator CynR 
Protein accessionYP_236554 
Protein GI161486730 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.875325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTAC GCCATATACG TTATTTGCTG GCAGTCGCCG ACCATGGCAA TTTCACCCGG 
GCGGCCGAGG CCCTGCATGT CTCGCAACCG GCGTTGTCGC AACAGATCAG GCAGCTGGAA
AGCAGTCTGG GTGTGCAACT GTTCGACCGC ACCCGCCGCA GCGTCGTGCC GACCGATGCC
GGCCGCGTGT ATCTGGACCA CGCGCGTCGC TGCCTGCTTG AGCTGGATGC CGGGAAGCGT
GCGCTCAACG ATGTCAGCGA CCTGTCACGC GGACAATTGC GCCTCGGCGT CACGCCTACC
TTCAGTGAAT ACCTGATAGC GCCGCTGATC GACCGCTTCA GCGCGCTGTA TCCGGGAGTG
GCAATCATCC TCACGGAGCT GCCTCTGGAG CAGATTACCG AGGCACTGAT CAGTGACGCG
CTCGATCTGG CCATCGGTTT TGCCGGCAGT CACGCTGTCG AGATAGACAG CCAGCCGCTG
TTCGATGAAC AACTGTGCCT GGTCATGGCC AAACCTGCCT CCGAGAAGCA GGCCGCGCTG
ACACTTGAGG ACCTGCAAGC GCTTCGCTTC GCCTTGCTGG CCCCCGGATT TGCCACTCGC
CAGCTGCTGG ATGCCTGGTG CCAGATGCAG AACTTCAAGC CGATCATTGG CCTGGAAGCG
AACTCGATTG CCATTTTGCT CAAGGTCGTC GCCCAGGGCC GCATGGCGAC CATTCTTCCC
GATGCCATCG TTCGCAAGCA GCCCGGGTTG TGCGAAGTCC AGACGATCCC TGCCCTGCCT
GGGCGAACGG TTGCGCTGCT GCGGCGTAAA AACGGCTACC AGAGCGCCGC CGCCAAGGCT
TTTGCAAAAC TGGTGAGCGA TATCAGAACA AAAATATGA
 
Protein sequence
MLLRHIRYLL AVADHGNFTR AAEALHVSQP ALSQQIRQLE SSLGVQLFDR TRRSVVPTDA 
GRVYLDHARR CLLELDAGKR ALNDVSDLSR GQLRLGVTPT FSEYLIAPLI DRFSALYPGV
AIILTELPLE QITEALISDA LDLAIGFAGS HAVEIDSQPL FDEQLCLVMA KPASEKQAAL
TLEDLQALRF ALLAPGFATR QLLDAWCQMQ NFKPIIGLEA NSIAILLKVV AQGRMATILP
DAIVRKQPGL CEVQTIPALP GRTVALLRRK NGYQSAAAKA FAKLVSDIRT KI