Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3478 |
Symbol | flgE |
ID | 3369005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4149634 |
End bp | 4150962 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653829 |
Product | flagellar hook protein FlgE |
Protein accession | YP_236548 |
Protein GI | 66046707 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTCA ATATCGGCCT TAGTGGGCTC TATGCTGCAA ACAAAAGTCT CGACGTTACC GGCAACAACA TTGCCAACGT CGCGACAACC GGTTTCAAAT CGTCACGTGC CGAGTTCGCT GATCAGTATG CTCAGTCGAT TCGCGGTACT TCCGGCAATA CCAGTGTCGG CAGTGGCGTG AGAACTGCGG CAGTTTCCCA GCAGTTCTCC CAGGGCAGCC TGACCACCGG AACAGCCAAC AGTCTGGACC TGGCCATCAA TGGCGACGGG TTCTTCATGA TGAGCAATAA CGGCGAGAAG CTGTACACCC GTGCCGGTGC ATTCCACACC GACAAGGAAG GCTACGTCGT CAATAGCAGC AACATGAAGC TGCAGGGTTA CAACGTTGAC GCCAATGGCG CTGTGGTGAC CGGCGCGCTC AGCGATCTGC GTGTGAATGC GTCCAACCTG GAGCCCAAGG CGACGACCAC GATCACCAAC TCCGCCAACC TGAACTCGAC AACTGCGCTG CCGACCGTTG CGACGTTCGA TGCGACCGAT ACCAATAGCT ACAACGTCAA GTACAGCACC CCGACTTACG ACACTCAGGG TAATGCGCAC ACCCTGGATC AGTATTTCGT CAAGACCGGC ACCAATACCT GGTCGATGTA TTCCCTGATG GACGGGCGCA GCATTTCCGA TCCGACGTCC ACCACGCCGG ACAAGAATAA CCTGACATTC GATTCCTCGG GCAAACTGGT GACCACCGCC GGCGGCGCCG TTCCTACTGA CAGCGCCAAC ATCAAGTTCA ACGCTGACGG TACATTCGCC GTGACCAACT GGGTTCCTGG CGTGCAGGTC GGTACTGGTA CGGCAGCTAC CTGGGCAGCC AATGGCGCGA CGGGCGCTGC TTCGATCAAG CTGGACATGT CGAGCACTAC CCAGACCGCT TCGGTATCCG GTCTGCTCAA GCAGGATCAG AATGGCTACG CCACTGGCCA GCTGAGCGGC ATGAACGTTG ACTCGAGCGG CAACCTGTTC GCCACTTACA CCAACGGCAA GTCGCAGGTG ATCGGTCAGA CTTCGCTGAC CAGCTTTGCC AACGTGCAGG GTCTGGCGCA GGCCGGCGGC ACCAACTGGC GTGAAACGTT CGCTTCCGGC GTCCCGGTGA GCGGCGCTCC ACAGTCGGGT ACGCTGGGTT ACATCACCGG TCAGGCGCTG GAAGAATCCA ACGTCGACCT GACCATGGAA CTGGTTAACC TGATCAAGGC GCAGAGCAAC TATCAGGCTA ACGCCAAGAC CATTTCCACA CAAAGCACCA TCATGCAGAC CACTATTCAG ATGACGTAA
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Protein sequence | MSFNIGLSGL YAANKSLDVT GNNIANVATT GFKSSRAEFA DQYAQSIRGT SGNTSVGSGV RTAAVSQQFS QGSLTTGTAN SLDLAINGDG FFMMSNNGEK LYTRAGAFHT DKEGYVVNSS NMKLQGYNVD ANGAVVTGAL SDLRVNASNL EPKATTTITN SANLNSTTAL PTVATFDATD TNSYNVKYST PTYDTQGNAH TLDQYFVKTG TNTWSMYSLM DGRSISDPTS TTPDKNNLTF DSSGKLVTTA GGAVPTDSAN IKFNADGTFA VTNWVPGVQV GTGTAATWAA NGATGAASIK LDMSSTTQTA SVSGLLKQDQ NGYATGQLSG MNVDSSGNLF ATYTNGKSQV IGQTSLTSFA NVQGLAQAGG TNWRETFASG VPVSGAPQSG TLGYITGQAL EESNVDLTME LVNLIKAQSN YQANAKTIST QSTIMQTTIQ MT
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